|
Name : ampC (AMED_5124) Accession : YP_003767291.1 Strain : Amycolatopsis mediterranei U32 Genome accession: NC_014318 Putative virulence/resistance : Resistance Product : beta-lactamase class A Function : - COG functional category : V : Defense mechanisms COG ID : COG2367 EC number : - Position : 5683129 - 5684028 bp Length : 900 bp Strand : + Note : - DNA sequence : GTGCCGTTCCCCCGAGCCCGGCGGGCCGCGCTCGCCGCGCTGCTCCTCGTTCCGCTGGCCGCCTGCACCGCGCAAGCGCC CCAGCCGGCACCGGCATCGGCAGCGACCCCGGCAGCGGCCCCGCAGCCGGACTTCGCCCCGCTCGAACGCAGCTTCGACG CCCGCCTCGGCGTGTACGCCCTCGACACCGGCTCGGGTCGCGAGATCACCCACCGCGCCGACGAGCGCTTCGGCTACGCC TCGACGCACAAGGTGTTCTCCGCCGGGGCCGTCCTCCGGCGCACCAGCCTCGACGGGCTCGCGAAGAACCTGACCTACAC CCGCGCCGACCTGCAGCCGAACTCCCCCGTCACCGAGAAGCACGTCACCACCGGCCTGTCGCTGCGCGAGGCGATGGACG CCACGCTGCGCTACAGCGACAACACGGCCGCGAACCTGCTGTTCCGCGAGCTCGGCGGGCCGGCCGGGCTCGCCGCCGCG CTGCGCGAGATCGGCGACACGACCACCCACGCCGACCGGATCGAACCGGGCCTCAACGACCTCGCGCCGGGCGACGTCCG GGACACGAGCACCCCGCGCGCGATGGCCGGCAGCCTGCGGGCGTTCGCCCTCGGCCCCGCGCTGCCGCCGGAAAAGCAGA CCGTGCTCACCGACATGATGCGCGCCAACACGACCGGCGCGGCCCTGATCCGGGCGGGCGCGCCGGCCGGCTGGGCGGTC GCCGACAAGACCGGGTCCGGCAGCTACGCCACGCGCAACGACATCGCGGTCGTCTGGCCGCCGGGGCGCGCGCCGATCGT GCTGATCGTCATGTCCAGCCGCCAGGCCGAGAGCGCCGATCACGACGACCGGCTCATCGCGCAGGCCGCGAAGCTGGCCC TCGACGCCTTCCGAAGCTAA Protein sequence : MPFPRARRAALAALLLVPLAACTAQAPQPAPASAATPAAAPQPDFAPLERSFDARLGVYALDTGSGREITHRADERFGYA STHKVFSAGAVLRRTSLDGLAKNLTYTRADLQPNSPVTEKHVTTGLSLREAMDATLRYSDNTAANLLFRELGGPAGLAAA LREIGDTTTHADRIEPGLNDLAPGDVRDTSTPRAMAGSLRAFALGPALPPEKQTVLTDMMRANTTGAALIRAGAPAGWAV ADKTGSGSYATRNDIAVVWPPGRAPIVLIVMSSRQAESADHDDRLIAQAAKLALDAFRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| blaCTX-M2 | ACF06162.1 | beta-lactamase CTX-M2 | Not tested | Tn5036-like | Protein | 1e-39 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ampC | YP_003767291.1 | beta-lactamase class A | AF367983.gene.p01 | Protein | 2e-63 | 55 |
| ampC | YP_003767291.1 | beta-lactamase class A | EU729727.1.gene1.p1 | Protein | 6e-42 | 53 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF395881.gene.p01 | Protein | 4e-42 | 53 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ234412.1.gene1.p01 | Protein | 3e-42 | 53 |
| ampC | YP_003767291.1 | beta-lactamase class A | GQ140348.1.gene1.p01 | Protein | 2e-41 | 52 |
| ampC | YP_003767291.1 | beta-lactamase class A | HQ641421.1.gene1.p01 | Protein | 2e-42 | 50 |
| ampC | YP_003767291.1 | beta-lactamase class A | EU555534.1.gene1.p01 | Protein | 6e-43 | 50 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF297554.1.gene1.p1 | Protein | 2e-42 | 50 |
| ampC | YP_003767291.1 | beta-lactamase class A | HM066995.1.gene1.p01 | Protein | 1e-41 | 50 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY034847.1.gene1.p01 | Protein | 9e-43 | 50 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ663489.gene.p01 | Protein | 1e-40 | 49 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ328639.gene.p01 | Protein | 9e-41 | 49 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY005110.1.gene1.p1 | Protein | 1e-39 | 49 |
| ampC | YP_003767291.1 | beta-lactamase class A | AB284167.2.gene1.p01 | Protein | 1e-40 | 48 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY033516.1.gene2.p01 | Protein | 2e-41 | 48 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY303807.gene.p01 | Protein | 6e-40 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF174129.3.gene9.p01 | Protein | 5e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY143430.1.gene1.p01 | Protein | 1e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | JF274246.1.gene1.p01 | Protein | 3e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY847144.1.gene1.p01 | Protein | 2e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | HM755448.1.gene1.p01 | Protein | 2e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ214367.1.gene1.p1 | Protein | 1e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | HQ833651.1.gene1.p01 | Protein | 3e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ214369.1.gene1.p1 | Protein | 1e-40 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF325134.1.gene1.p1 | Protein | 6e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY156923.1.gene1.p01 | Protein | 1e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY847146.1.gene1.p01 | Protein | 3e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF252622.2.gene2.p01 | Protein | 2e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | HQ398215.1.gene1.p01 | Protein | 2e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | HM803271.1.gene1.p01 | Protein | 4e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY847147.1.gene1.p01 | Protein | 3e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY847143.1.gene1.p01 | Protein | 4e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | EF418608.1.gene1.p01 | Protein | 2e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY822595.1.gene1.p01 | Protein | 2e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ416345.gene.p01 | Protein | 5e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ907381.1.gene1.p01 | Protein | 3e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY847145.1.gene1.p01 | Protein | 7e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | JF274243.1.gene1.p01 | Protein | 1e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ214366.1.gene1.p1 | Protein | 3e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | HQ833652.1.gene1.p01 | Protein | 8e-42 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | HQ913565.1.gene1.p01 | Protein | 2e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF252623.2.gene1.p01 | Protein | 1e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF189721.1.gene1.p01 | Protein | 4e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | EU136031.3.gene1.p3 | Protein | 9e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | JF274247.1.gene1.p01 | Protein | 5e-42 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY238472.1.gene1.p01 | Protein | 2e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | EF581888.1.gene1.p01 | Protein | 1e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY029068.1.gene1.p1 | Protein | 4e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | HQ166709.1.gene1.p01 | Protein | 9e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ214368.1.gene1.p1 | Protein | 2e-40 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF325133.1.gene1.p1 | Protein | 2e-41 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | JF274242.1.gene1.p01 | Protein | 1e-40 | 47 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY750914.gene.p01 | Protein | 1e-40 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AB205197.1.gene1.p01 | Protein | 6e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY995206.gene.p01 | Protein | 2e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY292654.1.gene1.p1 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY080894.1.gene1.p01 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AM411407.1.gene1.p01 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY598759.gene.p01 | Protein | 1e-40 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AM982522.2.gene1.p01 | Protein | 5e-39 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | HQ398214.1.gene1.p01 | Protein | 8e-42 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | EF219142.1.gene1.p01 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ061159.1.gene1.p01 | Protein | 1e-40 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY267213.1.gene1.p01 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ704396.1.gene1.p01 | Protein | 2e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ885477.1.gene1.p01 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | GU127598.1.gene1.p1 | Protein | 4e-40 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | JN227085.1.gene1.p01 | Protein | 9e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY847148.1.gene1.p01 | Protein | 3e-40 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY649755.1.gene1.p01 | Protein | 1e-40 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY157676.1.gene1.p01 | Protein | 9e-39 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ873739.1.gene1.p01 | Protein | 1e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ211987.1.gene1.p01 | Protein | 9e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ549244.1.gene1.p01 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF255298.1.gene1.p1 | Protein | 1e-40 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | HM167760.1.gene1.p01 | Protein | 6e-39 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ256091.1.gene1.p1 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ815436.1.gene1.p01 | Protein | 1e-40 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | EU177100.1.gene1.p01 | Protein | 2e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ810789.1.gene1.p01 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | EU202673.2.gene1.p2 | Protein | 3e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | EU545409.1.gene1.p1 | Protein | 3e-40 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF305837.gene.p01 | Protein | 2e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | AB177384.1.gene1.p01 | Protein | 4e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | Y10278.1.gene1.p01 | Protein | 3e-41 | 46 |
| ampC | YP_003767291.1 | beta-lactamase class A | U95364.1.gene1.p01 | Protein | 4e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ023162.1.gene1.p1 | Protein | 7e-39 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ223685.1.gene1.p01 | Protein | 2e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | X92507.1.gene1.p01 | Protein | 7e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ971899.1.gene1.p1 | Protein | 5e-38 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ557142.gene.p01 | Protein | 5e-41 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | JF966749.1.gene1.p01 | Protein | 7e-41 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | HM776707.1.gene1.p1 | Protein | 7e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | GQ870432.1.gene1.p1 | Protein | 4e-38 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | EF210159.1.gene1.p01 | Protein | 3e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | EU402393.1.gene1.p1 | Protein | 4e-41 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ567481.1.gene1.p01 | Protein | 1e-39 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | EF426798.1.gene1.p1 | Protein | 6e-41 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ102702.1.gene1.p1 | Protein | 4e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ125241.gene.p01 | Protein | 7e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | EF374097.1.gene1.p01 | Protein | 4e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | GQ149244.1.gene1.p01 | Protein | 7e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF518567.2.gene4.p01 | Protein | 4e-38 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ268764.2.gene6.p01 | Protein | 5e-41 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF488377.1.gene1.p1 | Protein | 3e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | GQ149243.1.gene1.p01 | Protein | 3e-39 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | X92506.gene.p01 | Protein | 6e-41 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY954516.1.gene1.p1 | Protein | 3e-38 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ416344.1.gene1.p01 | Protein | 1e-39 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | GQ351346.1.gene1.p01 | Protein | 1e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY515297.1.gene1.p1 | Protein | 4e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | Y14156.1.gene1.p01 | Protein | 2e-38 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ408762.1.gene1.p1 | Protein | 8e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF275256.gene.p01 | Protein | 3e-40 | 45 |
| ampC | YP_003767291.1 | beta-lactamase class A | U50278.1.gene2.p01 | Protein | 2e-40 | 44 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ005045.gene.p01 | Protein | 7e-38 | 44 |
| ampC | YP_003767291.1 | beta-lactamase class A | Z28968.gene.p01 | Protein | 2e-38 | 44 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY178993.1.gene1.p01 | Protein | 3e-32 | 44 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF135373.1.gene1.p01 | Protein | 3e-32 | 44 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY130285.1.gene1.p1 | Protein | 3e-27 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY130284.1.gene1.p1 | Protein | 3e-27 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | JF949915.1.gene1.p01 | Protein | 6e-27 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | JF949916.1.gene1.p01 | Protein | 1e-26 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY130282.1.gene1.p1 | Protein | 1e-26 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | DQ174308.1.gene1.p01 | Protein | 1e-26 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | JN051143.1.gene1.p01 | Protein | 8e-27 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | AM176554.2.gene1.p01 | Protein | 5e-27 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | EU274581.1.gene1.p1 | Protein | 1e-26 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY072920.1.gene1.p1 | Protein | 4e-28 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ919776.1.gene1.p01 | Protein | 4e-28 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | EU032604.1.gene1.p01 | Protein | 9e-27 | 42 |
| ampC | YP_003767291.1 | beta-lactamase class A | HM246246.1.gene1.p1 | Protein | 2e-27 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF468003.1.gene1.p1 | Protein | 1e-27 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ277414.1.gene1.p01 | Protein | 2e-27 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | Y10279.1.gene1.p01 | Protein | 9e-28 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ239002.1.gene1.p01 | Protein | 2e-27 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF516719.1.gene1.p1 | Protein | 9e-28 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | FJ360884.1.gene1.p01 | Protein | 2e-27 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | HQ661363.1.gene1.p1 | Protein | 1e-26 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | Y10280.1.gene1.p01 | Protein | 1e-27 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | Y10281.1.gene1.p01 | Protein | 2e-27 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AJ277415.1.gene1.p01 | Protein | 2e-27 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AY037780.1.gene1.p01 | Protein | 7e-28 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF495873.1.gene1.p1 | Protein | 2e-27 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AM941159.1.gene1.p01 | Protein | 5e-28 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF188199.1.gene1.p01 | Protein | 4e-28 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | JN416112.1.gene1.p01 | Protein | 3e-28 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF427130.1.gene1.p01 | Protein | 6e-28 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF347054.1.gene1.p1 | Protein | 9e-28 | 41 |
| ampC | YP_003767291.1 | beta-lactamase class A | AF190693.1.gene1.p01 | Protein | 2e-28 | 41 |
