Gene Information

Name : hemC (AMED_0481)
Accession : YP_003762704.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 485367 - 486296 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence :
ATGGGTACGCGTGGTTCGAAGCTCGCCCTCACCCAGACCGGGACCGTCGCCGACGCCCTGCGCGCCACCGGCGTCGAGGT
CGAGATCGTCAAGGTGACCACCCCCGGCGACAAGTCGCTGGCGCCGATCGCGACGATCGGGGTCGGCGTGTTCACCTCCG
CGCTGCGGGAAGCCTTGCTGCGCAACGAGGTCGACGTCATCGTCCACTCCTACAAGGACCTGCCGACGGCGCCGGAGCCC
GGGATCACGCTGGCCGCCGTGCCGCCCCGCGAAGACCCGCGGGACGCGCTGATCGCGCGCGACGGGCTCACGCTGGGTGA
GCTGCCGCCGGGTTCGACGGTGGGCACGGGGGCCGCGCGGCGCACCGCGCAGCTGCGTGCGCTGGGTCTCGGTTTGGAAA
TCGTGCCGATTCGCGGCAATATCGACACCCGCATGCGCAAGGTGACCGACGGCGAGCTCGATGCCGTGGTGCTGGCGCGT
GCCGGACTGGCCAGGGTCGGACTGGTCGAGGCGATCACCGAGACCCTCGACCCGATCCAGATGCTGCCCGCGCCCGCACA
GGGTGCACTGGCGGTGGAGTGCCGGTCCGCCGACGTGGACCTCGAGCACCTGCTCCGGTCCACTTTGGACGACGAGGGCA
CGCGGGCCGCGGTGACGGCCGAGCGGGCCCTGCTGGCCGCGCTCGAGGCGGGGTGCAGTGCGCCGGTGGGCGCGCTCGCC
GAGATCGTCGAAGATCTCGACGCCGAGGGCAAGGTCGTGGAACGGATCTCGCTGCGCGGCACCGCCGCGATCGAGGGCGA
GGAAGGTGCGGTGGACATGGTCCGGGCCATCGCACTGGCCGACAAGGACCAGGCTGCCCAGCTGGGCAAGGACCTGGCCG
CCGAGCTGCTGGACCTCGGAGCCGGAGCCCTCTCCGGTCCCGCTCAGTAG

Protein sequence :
MGTRGSKLALTQTGTVADALRATGVEVEIVKVTTPGDKSLAPIATIGVGVFTSALREALLRNEVDVIVHSYKDLPTAPEP
GITLAAVPPREDPRDALIARDGLTLGELPPGSTVGTGAARRTAQLRALGLGLEIVPIRGNIDTRMRKVTDGELDAVVLAR
AGLARVGLVEAITETLDPIQMLPAPAQGALAVECRSADVDLEHLLRSTLDDEGTRAAVTAERALLAALEAGCSAPVGALA
EIVEDLDAEGKVVERISLRGTAAIEGEEGAVDMVRAIALADKDQAAQLGKDLAAELLDLGAGALSGPAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-24 42
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-24 42