Gene Information

Name : AMED_4387 (AMED_4387)
Accession : YP_003766560.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Unknown
Product : LacI family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 4800554 - 4801597 bp
Length : 1044 bp
Strand : +
Note : -

DNA sequence :
GTGGTGGACCGGGCGAAGCCGGGGGAGCAGACGAGGACCCCTCCGTCGGGGCTGCGGCAGCCGAGCCTGGCCGACGTCGC
CGGCATGGCCGGCGTCTCGCACATGACCGTCTCGCGCGTGGTCAACGAGAGCGGGCCGGTGCGCCCGGAGACCCGCGAGC
GGGTGCTCGCCGCCGTGCAGAAGCTCGGGTACCGGCCCAACACCGCGGCGCGGGCGCTGGTCACCGGCCGGTCCGGCACC
CTCGGCGTGGTCGCGCTCGAGTCCAATCTCTACGGACCGGCGAGCACGCTCTACGGCATCGAGAACGCGGCCCGCGAGGC
CGGGTACGGCGTCGCGATCTGCAGCGTGACGCGGCCGGGCCGGACGTCGATCGGCGACGCGGTGGAGAGTCTGCGGCGCC
AGGCGGTGGAGGGGATCGTCGTGATCGCCCCGCACGTCACGGCCGGGCGGGCGCTCGACGCGGCGCCGTCGGACATCCCG
CTGGTCGCGGTCGGCGGTGGCGATGCGGCGCCGGTGCCGGTGCTCTCGGTCGACCAGTACGACGGCGCCCGGCGTGTCAC
CGAGCACCTGCTGTCCCTGGGGCACCGGACGGTGTGGCACCTGGCCGGGCCGGAGGACTGGCTGGAGGCCCGCGACCGGG
AACGCGGCTGGCGCGAGACGCTGGAGGGGCGCGGCCTGCGCGTGCCGGCGGTGGTGCGTGGTGACTGGAGCCCGCGTTCG
GGCTACGAGGCCGGGCGCGCACTGGTCGGCAAGCGGGGGCTCAAGGCGGTGTTTTCGGCCAATGACCAGATGGCGCTGGG
TCTGCTGCGGGCGTTCACCGAGGCGGGGATCCGGGTGCCGGAGGATGTGCACGTCGCCGGGTTCGATGATGTTCCGGAGG
CTGAGTACTTCACGCCGCCGCTGACCACGGTGCGGCAGGACTTCATCGAGGTCGGCCGCCGCACCTTCGGGCTTCTCGAG
GAGCGGATGGCGGGCGGGGATGCCGGGGCTCGGCATCTGGTGCCCGCGGAGCTGGTCGTCCGGGAGAGCACCCGGCCGCG
CTGA

Protein sequence :
MVDRAKPGEQTRTPPSGLRQPSLADVAGMAGVSHMTVSRVVNESGPVRPETRERVLAAVQKLGYRPNTAARALVTGRSGT
LGVVALESNLYGPASTLYGIENAAREAGYGVAICSVTRPGRTSIGDAVESLRRQAVEGIVVIAPHVTAGRALDAAPSDIP
LVAVGGGDAAPVPVLSVDQYDGARRVTEHLLSLGHRTVWHLAGPEDWLEARDRERGWRETLEGRGLRVPAVVRGDWSPRS
GYEAGRALVGKRGLKAVFSANDQMALGLLRAFTEAGIRVPEDVHVAGFDDVPEAEYFTPPLTTVRQDFIEVGRRTFGLLE
ERMAGGDAGARHLVPAELVVRESTRPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0036 YP_001220775.1 LacI family transcriptional regulator Not tested chp/tomA region Protein 9e-52 44