Gene Information

Name : AMED_4355 (AMED_4355)
Accession : YP_003766530.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Unknown
Product : Fe-S oxidoreductase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 4765253 - 4767355 bp
Length : 2103 bp
Strand : +
Note : -

DNA sequence :
GTGCTCGTTCGTCTCATCCTCGGCCTGCTCATGACCGTCGTCGGCCTCGCCGTCGCCGGCAAGCGCGTGGCCTTCCTGTA
CCGGCTGATCAAGGCCGGCCAGCCCGACACCAAACGGTCGGACGACCTCGGTGCCCGCGTCTTCGCGCAGGTGCGCGAGG
TGTTCGGCCAGCGCAAGCTGCTGAAGTGGTCGGTGCCCGGCCTGGCGCACTTCTTCACGTTCTGGGGCTTCGTGATCCTC
GCTTCGGTGTACCTCGAGGCGTACGGCGCGCTCTTCGACGAGAAGTTCGCCATCCCGTGGATCGGCCACTGGGCGGTGCT
CGGCTTCCTGCAGGACTTCATCGCCGTCGCCGTGGCGGTTTCGCTCGGCGTGTTCACGATCATCCGCATCCGGAACGCCC
CCGAGCGCAAGGATCGCGCGTCGCGGTTCTACGGCTCGCACACCGGCGGCGCGTGGCTGATCCTCGCCATGATCTTCAAC
GTCGTCTGGACGATGTTCTTCTTCCGCGGCGCCTCTTCGGCGTCCGGCAACTTTCCGTACGACAACGGCGCGTACGTCTC
GCTCGGCGTCGGGAACCTCCTGGAGCCGCTCGGGCACTCGACGACCGAGGTGCTGGAGACGGTCGGCCTGCTCCTGCACA
TCGGCGTCATGCTGGTGTTCCTGTCGATCGTGCTCTACTCCAAGCACCTGCACATCTTCGTCGCGCCGCTCAACGTCTCG
GCGAAGCGGCTGCCGGACGCGCTCGGCCCGCTGCTGCCGATGGAGTCCGCGGGCAAGCCGATCGACTTCGAGGACCCCGC
CGAAGACGACACGTTCGGCCGCGGGAAGATCGGCGACTTCACGTGGAAGGGCATGCTCGACTTCGCCACGTGCACCGAAT
GCGGCCGCTGCCAGTCGCAGTGCCCGGCGTGGAACACCGGGAAGCCGTTGTCACCCAAGCTCGTCATCATGAACCTGCGC
GACAACCTGTTCGAGGAAGCGCCCTACATCCTGGCGGGCACCGAGCACGAGGGCGCGCGCCCGCTGGTCGGGCCGGAGGA
CGACGGCGGTGTGATCGATCCGGACGTGCTCTGGTCGTGCACGACCTGCGGTGCGTGCGTCGAGCAGTGCCCGGTGGACA
TCGAGCACGTCGACCACATCGTCGACATGCGCCGCTACCAGGTGATGATCGAGTCGGCGTTCCCGACCGAGCTGGGCGGG
CTGTTCAAGAACCTGGAGACCAAGGGCAACCCGTGGGGCCAGAACAACGCGGAGCGCCTCACCTGGACCAAGGACCTGGG
CTTCGACGTCCCGGTGTTCGACGGCGAGCTGGCCGAGGACGTCGAGTACGTCTACTGGGTCGGCTGCGCCGGCGCGTTCG
ACGACCAGGCGCGCAAGACCGTCCGCGCCACGGCGGAGCTGCTGCACATCGCCGGGGTGAGGTACGTGGTGCTGGGCAAG
GAGGAGTCCTGCACCGGTGATCCGGCGCGCCGCGCGGGCAACGAGTTCCTCTTCCAGATGATGGCGCAGCAGACGGCGGA
GACGCTGAACGCCGTGTTCGAGGGCCGCGAGCCGCGGCTGCGCAAGATCGTCACGACCTGCCCGCACTGCCTGAACACGC
TGAGCCGCGAATACCCCCAGCTGGACGGCCACTACGAGGTGGTCCACCACACGCAGCTGCTCAACCGCCTGGTCCGCGGC
GGGCAGCTGACCCCGGTGAAGCCGGTCGAGGACGGCCCGAAGGTCACCTACCACGATCCCTGCTACCTGGGCCGTCACAA
CAAGGTCTACACGCCACCGCGCGAGCTGGTCGGCGCGACGGGCGCCCAGCTGGCGGAGATGCCCCGCCACGCGGACCGCG
CCCTCTGCTGCGGCGCCGGCGGCGCCCGCATGTGGATGGAGGAGCAGATCGGCAAGCGCATCAACCTGGAGCGGGTCGAC
GAGGCGATCGCCACGGACGCGGAGACGATCGTGACGGGCTGCCCGTTCTGCCGCGTGATGCTGACCGACGGCCTGGTCCA
GCGCCAGAGCGAGCAGAAGGCGGAGAACGTCGACGTGCGCGATGTCGCCCAGCTGCTGCTGGAACGGGTGAAAGCCGCGG
ACACCTCGGCGCCGACGGTCTGA

Protein sequence :
MLVRLILGLLMTVVGLAVAGKRVAFLYRLIKAGQPDTKRSDDLGARVFAQVREVFGQRKLLKWSVPGLAHFFTFWGFVIL
ASVYLEAYGALFDEKFAIPWIGHWAVLGFLQDFIAVAVAVSLGVFTIIRIRNAPERKDRASRFYGSHTGGAWLILAMIFN
VVWTMFFFRGASSASGNFPYDNGAYVSLGVGNLLEPLGHSTTEVLETVGLLLHIGVMLVFLSIVLYSKHLHIFVAPLNVS
AKRLPDALGPLLPMESAGKPIDFEDPAEDDTFGRGKIGDFTWKGMLDFATCTECGRCQSQCPAWNTGKPLSPKLVIMNLR
DNLFEEAPYILAGTEHEGARPLVGPEDDGGVIDPDVLWSCTTCGACVEQCPVDIEHVDHIVDMRRYQVMIESAFPTELGG
LFKNLETKGNPWGQNNAERLTWTKDLGFDVPVFDGELAEDVEYVYWVGCAGAFDDQARKTVRATAELLHIAGVRYVVLGK
EESCTGDPARRAGNEFLFQMMAQQTAETLNAVFEGREPRLRKIVTTCPHCLNTLSREYPQLDGHYEVVHHTQLLNRLVRG
GQLTPVKPVEDGPKVTYHDPCYLGRHNKVYTPPRELVGATGAQLAEMPRHADRALCCGAGGARMWMEEQIGKRINLERVD
EAIATDAETIVTGCPFCRVMLTDGLVQRQSEQKAENVDVRDVAQLLLERVKAADTSAPTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fadF YP_005684256.1 Protein fadF Not tested PiCp 7 Protein 5e-143 46
fadF YP_005686348.1 Protein fadF Not tested PiCp 7 Protein 5e-143 46
cpfrc_01915 YP_003784315.1 hypothetical protein Not tested PiCp 7 Protein 5e-143 46
fadF YP_005682164.1 Protein fadF Not tested PiCp 7 Protein 5e-143 46