Gene Information

Name : AMED_3162 (AMED_3162)
Accession : YP_003765355.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Resistance
Product : multidrug ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3412699 - 3413601 bp
Length : 903 bp
Strand : -
Note : -

DNA sequence :
ATGACGATCGAAATCCGGGGCCTGACCAAGCGGTACGGGCCTGACACCGTGGTGGACGACCTGTCGTTCACCGTCCACCC
CGGGCAGGTGACCGGGTTCCTCGGGCCCAACGGCGCCGGCAAGTCCACGACCATGAAGATGATCGTGGGCCTGGCCGCGC
CCACGCGGGGCTCGGTCACCATCGGCGGGCGCCGGTACCGGGACCTCGCCGTGCCGCTCACCGAGGTGGGCGCGTTGCTC
GACGCCGGTGCCGTCCACGGTGGCCGGAAGGCCCGCGACCACCTGCTGGCCCTCGCGGTGAGCAACGGCCTTCCCCGCCG
CCGGGTCGGCGAGGTGCTCGGCCGGACCGGGCTGGACGCTGTGGCCGGGAAGCGGGCGGGTGGGTTCTCGCTCGGGATGC
GGCAGCGGCTCGGCCTCGCCGCGGCGTTGCTCGGCGACCCGCGGGTGCTGATCTTCGACGAGCCGGTGAACGGTCTCGAC
CCGGAAGGGATCCGCTGGATCCGGGACTTCATGCGCTCACTCGCCGGCGAGGGCCGGGCGGTGCTGGTGTCCAGCCACCT
GATGAGCGAGATGGCGCAGACCGCCGATCACCTCGTCGTCATCGGCCGGGGGCGGCTCGTCGCCGACACCACGGTGAGCG
AGCTCGTGCGTGGCGAAGGCACCGTGCTCGTCCGCACCGCCGAGCCGGGCTTCGCGCGGCTGCTGACGACCGCCGGGGCC
GCCGTGCGGGAGGGGACCGAGGCGTCGCTCGTCGTGTCCGGCATGACGAGCGCGGAGATCGGCAAAGTCGCGGCCTACCA
CGGCGTCGCGCTCGCCGAGCTCACGCCGCAGCGCGTCTCGTTGGAGGACGCCTTCATGGAACTGACCAAGGACCGCACCG
ACTACCAGGGGGCGATCGCATGA

Protein sequence :
MTIEIRGLTKRYGPDTVVDDLSFTVHPGQVTGFLGPNGAGKSTTMKMIVGLAAPTRGSVTIGGRRYRDLAVPLTEVGALL
DAGAVHGGRKARDHLLALAVSNGLPRRRVGEVLGRTGLDAVAGKRAGGFSLGMRQRLGLAAALLGDPRVLIFDEPVNGLD
PEGIRWIRDFMRSLAGEGRAVLVSSHLMSEMAQTADHLVVIGRGRLVADTTVSELVRGEGTVLVRTAEPGFARLLTTAGA
AVREGTEASLVVSGMTSAEIGKVAAYHGVALAELTPQRVSLEDAFMELTKDRTDYQGAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 1e-39 46
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 1e-39 46
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 5e-41 44
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 2e-40 42