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Name : rpoE (AMED_2991) Accession : YP_003765186.1 Strain : Amycolatopsis mediterranei U32 Genome accession: NC_014318 Putative virulence/resistance : Unknown Product : ECF subfamily RNA polymerase sigma-70 factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 3200635 - 3201186 bp Length : 552 bp Strand : + Note : - DNA sequence : ATGACCCACCGTGAGGACGACGACCGCGTCACGGCGCTGGCTCTCGCCGCCGGCCGCGGTGACCGGCGCGCGCTGGAGGC GTGGGTCAGCGCCACCCAGGCTGACATCTGGCGCTTCCTCGCCCACCTCACCGACACCGCCGCGGCCGACGACCTGACGC AGGAGACCTACCTTCGCGCCTTCGGCAGCCTTCGCCGCTTCGCGGGCCGCTCGTCTTCGCGGACGTGGCTGCTGTCGATC GCGCGCCGCGTCGTCGTCGACCAGATCCGGGCCGCCGGCGCGCGGCCCAAGATCGCCGCCACCGACTGGGAAGCCGCCGC CCAGCGCACCCCTGATCCCGCGGCCGGCTTCGAGGAGCTCGTCGAACTGCGCCTGCTGCTCGACGGCCTGGAACCGGACC GGCGCGAGGTGCTCGTCCTGACCCAGGTGCTCGGGCTGTCCTACGCCGAAGCGGCCGACGTCTGCGGCTGCCCGATCGGC ACCGTCCGCTCCCGCGTCGCCCGCGCCCGCGAGGACCTGATCCAGGCCCGGCGCGCCCGCGGGGCCGGCTGA Protein sequence : MTHREDDDRVTALALAAGRGDRRALEAWVSATQADIWRFLAHLTDTAAADDLTQETYLRAFGSLRRFAGRSSSRTWLLSI ARRVVVDQIRAAGARPKIAATDWEAAAQRTPDPAAGFEELVELRLLLDGLEPDRREVLVLTQVLGLSYAEAADVCGCPIG TVRSRVARAREDLIQARRARGAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 2e-15 | 56 |
