Gene Information

Name : betB (AMED_2620)
Accession : YP_003764817.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Unknown
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2801586 - 2802944 bp
Length : 1359 bp
Strand : -
Note : -

DNA sequence :
ATGACCCGCACGCTCGACCTGACCGACCCGGCGACCGGCGAGGTGTTCGGCACCAGCCCCATCGCCGAGCAGTCCGAAGT
GGACATGGCGCTCGAATCGGCCGCGCAAGCGTTTGCGATCTGGCGGCGCAGCACCCCGGCGCAGCGGCAGCTGGCCCTGC
TGAAGATCGCCGACACGCTGGAAGCCCGGGCGTCCGAGTTCGCCGACCTCGAAGTCCGGGAGACCGGCAAGATCCGGTCC
GTGGTCCTCGACGAGGAGATCCCGGAGTGCGTGAGCGCCCTGCGGTTCTTCGCCGGAGCCGCCCGGCACCTGGAGGGCAC
CGCGGCCGGCGAGTACACGCCCGGGCACACGTCGGTGATCCGCCGCGAGCCGGTGGGCGTCTGCGCGCAGATCGCGCCGT
GGAACTACCCGCTGATGATGGCGGTCTGGAAGATCGCACCGGCCCTGGCGGCGGGCAACACGGTGGTGCTCAAGCCGGCC
GAGACCACCCCGTCGACGGCCGTGCTGCTGGCCCGCATCGCGGCGGAGTTCCTGCCGCCGGGGGCGTTCACGGTCCTGAC
GGGCGACCGCGACACCGGCCGAGCACTGGTCCGGCACCCGGCGACGGACCTGGTCTCGATCACCGGCTCGACCCGGGCAG
GCATCGACGTCGCCACGGTGGCGGCCGCCGACCTCAAGCGCACCCACCTGGAACTGGGCGGCAACGCACCACTGCTGGTC
TTCCCGGACGCCGACCTCGCCGAGGCAGTGGAGGGCATAGTGGGCGCGGCGTTCTACAACGCGGGCCAGGACTGCACAGC
GGGCAGCCGGGTGCTGGTACACGAGTCGATCCACGACGACTTCGTCGCTTCGCTGGCGAAGGCCGCATCGGCCCAGACAC
CGGGCGTCGACTACGGGCCGTTGAACAGTGCGGCGCAGTTCTCACGCGTCGAGGACCTCATCGCAAGGCTGCCATCACAC
GCGCGCATCGAGACCGGCGGCACCCGGTACAGCTCTCGCGGGTTCTACTTCTCCCCCACGGTGATTTCGGGAGTGCGGCA
GGACGACGAGATCGTCCAGGAGGAGATCTTCGGCCCGGTCATCACGGTCCAGTCCTTTTCGGACGAAGCCGCGGCGGTCG
CACTGGCCAACGACGTCCCCTACGGACTGGCATCCTCGGTGTGGACGAAGGACTTAGCCGTCGCCGCACGGGTGACAGCG
GAGCTGAACTTCGGCTGCGTGTGGGTCAACACGCACGGACCGTTGGTAGCGGAGATGCCCCACGGAGGCTTCGCCCACTC
AGGCCACGGCAAGGACCTCTCGACGTACGCATTCACCGAGTACACCCGAGTCAAGCACGTGATGACAAGGTTCGCCTGA

Protein sequence :
MTRTLDLTDPATGEVFGTSPIAEQSEVDMALESAAQAFAIWRRSTPAQRQLALLKIADTLEARASEFADLEVRETGKIRS
VVLDEEIPECVSALRFFAGAARHLEGTAAGEYTPGHTSVIRREPVGVCAQIAPWNYPLMMAVWKIAPALAAGNTVVLKPA
ETTPSTAVLLARIAAEFLPPGAFTVLTGDRDTGRALVRHPATDLVSITGSTRAGIDVATVAAADLKRTHLELGGNAPLLV
FPDADLAEAVEGIVGAAFYNAGQDCTAGSRVLVHESIHDDFVASLAKAASAQTPGVDYGPLNSAAQFSRVEDLIARLPSH
ARIETGGTRYSSRGFYFSPTVISGVRQDDEIVQEEIFGPVITVQSFSDEAAAVALANDVPYGLASSVWTKDLAVAARVTA
ELNFGCVWVNTHGPLVAEMPHGGFAHSGHGKDLSTYAFTEYTRVKHVMTRFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 1e-101 49