Gene Information

Name : AMED_2489 (AMED_2489)
Accession : YP_003764686.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Resistance
Product : solute/sodium (Na+) symporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 2649439 - 2651031 bp
Length : 1593 bp
Strand : -
Note : -

DNA sequence :
ATGACCGCGCTCGCCGCGGGCGGGCAGGCCGCCAGCGACCCCGTCGTCAACACTGTCGTGTTCGCCTTGTTCGTGGCGAT
CACGCTGTACGTCGTCTACCGGGCCGGCAGCCGGACCTCCTCGACGTCGGACTACTACGCCGCGGGCAGTGCCTTCACCG
GCCGCCAGAACGGCATCGCGCTCTCCGGCGACTTCCTCTCGGCGGCGTCGTTCCTCGGCATCGCGGGCGCGATCGCCGTC
CACGGCTACGACGGCTTCCTCTACTCGATCGGCTTCCTGGTCGCCTGGCTGGTCGACCTGCTGCTGATCGCCGAGCTGCT
GCGCAACACCGGCCGGTTCACGATGGGCGACGTCGTCAGCTTCCGGATGAACCAGCGGCCGGTCCGCGCCGCGGCGGCGA
CGTCGACCCTGGTGATCTCGCTGTTCTACATGCTGGCGCAGATGGCGGGCGCCGGCGGCCTGGTCGCGCTCCTGCTCAAC
ATCCACACCCGGCTCGGGCAGGCGCTGGTGATCGGCGTGGTCGGCCTGGTCATGGTGCTGTACGTGCTGGTCGGCGGGAT
GAAGGGCACCACGTGGGTGCAGATCATCAAGGCCGGCGTGCTGATGCTGGCCGTGGTGCTGATCGCGGTCTTCCTGTTCG
GCAAGTTCGGCTTCAGCTTCTCGAACCTGCTCTCGGCCGCAACCGAGAAGAGCCCGCTGGGCGAGCACCTCCTGGAACCG
GGCGGCTCCTACGGCCAGGACGACACCACCAAGCTCGACTTCGTGTCGCTCGCACTGGCCCTGGTGCTCGGTTTGTCGTC
GCTGCCCCACCTGCTGATGCGCTTCTACACGGTGCCGAACTCCTTCGAGGCGCGCCGCTCGGTCGTCTGGGCCACCGTCT
GCATGCTCATCTTCTACGTGTGCACGCTGGTGATCGGCTTCGGCGCGGCGGCGCTGGTCGGCGCGGACGAGATCAAGAGC
GCACCGGGCGGGGAGAACTCGGCGGCGCCGCTGCTGGCGCTGCACATCGGCGGGACGCTGCTGCTGGGCGTGATCGCCGC
GGTGGCGTTCGCGACGATCCTCGCGGTGGTGGCCGGGCTGACGATCACCGCGTCGGCCTCGTTCGCCCACGACGTCTACG
CGAACATCTTCAAGCGCGGCAAGGCCGAGCCGGCGGACGAGGTCCGGGTGGCGCGGATGACCGCGATCGTGGTGGGCGTG
CTGGCGATCGTCGGCGGCGTGCTGGCGAACGGGCAGAACGTCGCGTTCCTGGTGGCGCTGGCGTTCGCGGTGGCGGCGTC
GGCGAACCTGTCGACGCTGCTGTACTCGTTGTTCTGGAAGCGGTTCAACACCACCGGCACGCTGTGGGGCATGTACGGCG
GCCTGATCGCGTGCCTGCTGCTGGTGCTGTTCTCGCCGGTGGTCTCGGGCGCTCCCGACTCGATCTTCAAGAGCTTCGAC
TTCGCCTGGTTCCCGCTGAAGAACCCGGGCCTGGTGTCGATCCCGTTCTCGTTCCTGTGCGGGTTCGTCGGAACGCTGGT
GGGCCGGCCGAAGGCGGACGCGGAGAAGCAGGCCGAGATGGAGGTCCGCTCGATGACCGGCATCGGGGGCTGA

Protein sequence :
MTALAAGGQAASDPVVNTVVFALFVAITLYVVYRAGSRTSSTSDYYAAGSAFTGRQNGIALSGDFLSAASFLGIAGAIAV
HGYDGFLYSIGFLVAWLVDLLLIAELLRNTGRFTMGDVVSFRMNQRPVRAAAATSTLVISLFYMLAQMAGAGGLVALLLN
IHTRLGQALVIGVVGLVMVLYVLVGGMKGTTWVQIIKAGVLMLAVVLIAVFLFGKFGFSFSNLLSAATEKSPLGEHLLEP
GGSYGQDDTTKLDFVSLALALVLGLSSLPHLLMRFYTVPNSFEARRSVVWATVCMLIFYVCTLVIGFGAAALVGADEIKS
APGGENSAAPLLALHIGGTLLLGVIAAVAFATILAVVAGLTITASASFAHDVYANIFKRGKAEPADEVRVARMTAIVVGV
LAIVGGVLANGQNVAFLVALAFAVAASANLSTLLYSLFWKRFNTTGTLWGMYGGLIACLLLVLFSPVVSGAPDSIFKSFD
FAWFPLKNPGLVSIPFSFLCGFVGTLVGRPKADAEKQAEMEVRSMTGIGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 3e-92 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMED_2489 YP_003764686.1 solute/sodium (Na+) symporter BAC0564 Protein 4e-51 46
AMED_2489 YP_003764686.1 solute/sodium (Na+) symporter BAC0570 Protein 3e-41 43