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Name : AMED_2258 (AMED_2258) Accession : YP_003764458.1 Strain : Amycolatopsis mediterranei U32 Genome accession: NC_014318 Putative virulence/resistance : Unknown Product : drug exporter of the RND superfamily Function : - COG functional category : R : General function prediction only COG ID : COG2409 EC number : - Position : 2413203 - 2415389 bp Length : 2187 bp Strand : - Note : - DNA sequence : GTGGCGACCTTCCTGTACCGGCTCGGCCGGTTTTCCTTCCGGCGCAGAGCGCTGGTCGCGGCCGTCTGGGCGGCGGTTTT GGTGGCGCTGGGCCTGGGCGCGCTGACGCTGTCGGGCCAGCTGTCGAACTCGGTGACGATCCCCGGCACCGAGTCGCAGC GGGCGGTCGACCAGCTCACCGAGAAGTTCCCGCAGGCCAACGCGGGTGGCGCCACCGCGCGGGTGATCATCGAGGCTCCG GCCGGGACCACGGTGACCGACGCGAAGGGCAAGGCCGCCGTCGAAGCCCTGGTCGGGCAGCTGAAGACGGCGCCGAAGGT CGCCGCCGTGGTCGACCCGTTCCAGGCGCAGTCGATCTCACCCGATCGGCGCGTCGCGCTCGCTCAGGTCAGTTACGGAG CGAAGGCGTACGAGCTGACCGACGGAGACCGCCAGGCGCTCCTCGACACCGCGAACGCCGGACGCGCCGCCGGGTTCACC ATCGAGTTCGGCGGTGACGCCGTGCAGGGCGCGCCCGCGACCGGGGCCACCGAAGGCCTGGGCGTCGCGGTCGCCGCCGT CGTGCTGGTCATCACGTTCGGCTCGCTGCTCGCGGCCGGGATCCCGCTGCTCACCGCGCTGATCGGCGTCGGCACCGGAA TGGCGGGCATCTTCGTCGCCTCCGGCTTCCTCGAGCTGAACTCGAACACCCCGATCCTGGCGCTGATGATCGGCCTGGCC GTCGGCATCGACTACGCGCTGTTCATCGTGTCGCGCTACCGCCACGAACTGAGCATCGGCCGCGATCCCGAAGAAGCCGC CGGACGCGCCGCCGGCACCGCCGGGTCCGCCGTGGTCTTCGCCGGGCTCACCGTCATCATCGCGCTGGCCGGGCTCACCG TGATCGGCATCCCGTTCCTCGGCCAGATGGGCGTCGCCGCGGCCGTCACCGTCGCGATCGCCGTGCTCATCGCCCTGACG CTGCTGCCCGCCATCCTCGGCTTCGCCGGGGCCCGGGTCGCCGGCAGCCGCATCCGGCTGCGCCGCAAGCCGGTCGAACC GACGCACGGCGAACGCTGGGCGCGGTTCGTCGGCCGCCACCGGATCCCGGTGCTGCTGGTCGCGCTGGCCGGGATGGCCG TCGTCGCGCTGCCCGCGCTGAGCATGCAGCTCGGCCTGCCCAACGACAGCACGGCCGCGCCGGAGTCGACGCAGCACAAG GCGTACGAGATCGCGAGCCGCAGCTTCGGCCCGGGCTCCAACGGGCCGCTGCTGGTCGTCGTCGACGTCTCTTCGAGCAC CAACCGCCAGGCCGCGCTCGGCCGGGCCGCGGCCGACATCCAGAAGCTGCCGGACGTCGCCGCCGTCACCCCGCCGCGGG TCAACCAGAACGGTGACACGGCGCTGCTCACGGTGATCCCGAAGAGCGGCCCGAGCAGCGCGCAGACCGAGGACCTGGTG GCCGCGATCCGCACCGAATCCGGCGCGCTGGAGACCGGGACCGGCGCGAAGCTGTCCGTCACCGGCCAGACCGCGGCGAA CATCGACGTCTCCGAGAAGCTTTCGGACGCGATGCTGCCGTACCTGGCGCTGATCGTCGGGCTGGCGTTCGTGCTGCTGA TGCTGGTGTTCCGCTCGGTGGTGGTGCCGCTGAAGGCGACGCTCGGCTTCCTCGGCTCGGTTGCGGCGACGTTCGGCGCG GTGGTCGCGGTGTTCCAGTGGGGCTGGCTGACGGACCTGCTCGGCGTCGCCTCGACCGGCCCGATCATGAGCATGCTGCC GATCCTGCTCATCGGTGTCCTCTTCGGACTCGCGATGGACTACCAGGTGTTCCTGGTGACGCGAATGCGCGAGGAGCACG TCCACGGCGCGGAGCCGCAGGAGGCGATGGTCACCGGCTTCCGCCACGGCGCGCGCGTGGTGGTCGCGGCGGCGCTGATC ATGATCAGCGTGTTCGCCGGGTTCGTGCTCGCGGAGTCGTCGCTGATCCAGTCGATCGGCTTCGCCCTGGCGTTCGGCGT GCTGGTGGACGCGTTCGTGGTCCGCATGACGCTGGTCCCGGCGGTGATGTCCCTGCTCGGCCGCGGCGCGTGGTGGCTGC CGCAGTGGCTGGACCGGATCCTGCCGGACGTCGACGTCGAGGGCGAGAAGCTCACGAAGCACCTGGACGAGCCCGAGGAG CGGGAGCTGGTCGGCGCGAGCCGCTGA Protein sequence : MATFLYRLGRFSFRRRALVAAVWAAVLVALGLGALTLSGQLSNSVTIPGTESQRAVDQLTEKFPQANAGGATARVIIEAP AGTTVTDAKGKAAVEALVGQLKTAPKVAAVVDPFQAQSISPDRRVALAQVSYGAKAYELTDGDRQALLDTANAGRAAGFT IEFGGDAVQGAPATGATEGLGVAVAAVVLVITFGSLLAAGIPLLTALIGVGTGMAGIFVASGFLELNSNTPILALMIGLA VGIDYALFIVSRYRHELSIGRDPEEAAGRAAGTAGSAVVFAGLTVIIALAGLTVIGIPFLGQMGVAAAVTVAIAVLIALT LLPAILGFAGARVAGSRIRLRRKPVEPTHGERWARFVGRHRIPVLLVALAGMAVVALPALSMQLGLPNDSTAAPESTQHK AYEIASRSFGPGSNGPLLVVVDVSSSTNRQAALGRAAADIQKLPDVAAVTPPRVNQNGDTALLTVIPKSGPSSAQTEDLV AAIRTESGALETGTGAKLSVTGQTAANIDVSEKLSDAMLPYLALIVGLAFVLLMLVFRSVVVPLKATLGFLGSVAATFGA VVAVFQWGWLTDLLGVASTGPIMSMLPILLIGVLFGLAMDYQVFLVTRMREEHVHGAEPQEAMVTGFRHGARVVVAAALI MISVFAGFVLAESSLIQSIGFALAFGVLVDAFVVRMTLVPAVMSLLGRGAWWLPQWLDRILPDVDVEGEKLTKHLDEPEE RELVGASR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CMM_0093 | YP_001220832.1 | RND family transporter | Not tested | chp/tomA region | Protein | 3e-92 | 46 |
