Gene Information

Name : kdpE (AMED_1897)
Accession : YP_003764108.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2036633 - 2037331 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGACCCGGGCGCCACCGTGCTGGTGGTCGACGACGAACCGCAGATCGTGCGGGCACTGCGGATCAACCTGACCGC
CCGCGGCTACAAGGTGATCACCGCGCACGACGGCACGGCCGCGTTGAAAGCGGTGGCCGAGACCAAGCCCGACGTGGTGG
TTCTGGACCTCGGCCTGCCCGACCTCGACGGCACCGAAGTGATCGCGGGCCTGCGCGGCTGGACGACGGTCCCGATCATC
GTGCTCTCGGCGCGCGGCGACTCGGCCGACAAGGTCGAGGCCCTCGACGCGGGCGCCGACGACTACGTGACGAAGCCGTT
CGGCATGGACGAGCTGCTGGCGCGGCTGCGCGCGGCGGTCCGCCGTTCGGCGGTGGCGGGCGCGGACGACGCGGACGCGG
TGGTGGACACGGCGTCGTTCAGCGTGGACCTGGCGGCGAAGAAGGTCCGCCGCCACGACGGCGTGGAGGTGCACCTGACG
AAGACGGAGTGGGGCGTGCTGGAGCTGCTGGTCCGCAACCGCGGCCGGCTGGTGGCGCAGAAGCAGCTCCTGCACGAGGT
GTGGGGCCCGTCGTACGAGACGGAGTCGCACTACCTGCGGGTGTACCTGGCCCAGCTGCGGCGCAAGCTGGAACGGGAAC
CCTCCCGGCCCCGGCACCTGCTCACCGAACCGGGGATAGGTTACCGCTTCGAGGTCTGA

Protein sequence :
MSDPGATVLVVDDEPQIVRALRINLTARGYKVITAHDGTAALKAVAETKPDVVVLDLGLPDLDGTEVIAGLRGWTTVPII
VLSARGDSADKVEALDAGADDYVTKPFGMDELLARLRAAVRRSAVAGADDADAVVDTASFSVDLAAKKVRRHDGVEVHLT
KTEWGVLELLVRNRGRLVAQKQLLHEVWGPSYETESHYLRVYLAQLRRKLEREPSRPRHLLTEPGIGYRFEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 9e-27 41
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_003764108.1 two-component system response regulator VFG1390 Protein 6e-24 42