Gene Information

Name : AMED_1584 (AMED_1584)
Accession : YP_003763799.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Resistance
Product : solute:Na+ symporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1696525 - 1698132 bp
Length : 1608 bp
Strand : -
Note : -

DNA sequence :
ATGACGAACATCGCCGCGGGCGTGGAAGGCAGCAACCCGCTCCTCAACATCCTCATCTTCGCCGCCTTCGTGCTCATCAC
CCTGGTGATCGTGTTCCGGGCCAGCCGCAACACGAAGACGGCCTCGGACTACTACGCCGCCGGCCGCGCGTTCACCGGCC
CGCAGAACGGCATCGCCATTTCGGGTGACTACCTGTCGGCGGCGTCGTTCCTCGGCATCGCCGGCGCGATCGCCATCAAC
GGCTACGACGGCTTCCTCTACTCCATCGGCTTCCTGGTGGCGTGGCTCGTCGCGCTGCTGCTGGTCGCGGAACTGCTGCG
CAACACCGGCAAGTTCACGATGGGCGACGTCCTGGCGTTCCGGATGAAGCAGCGCCCGGTGCGGGCCGCGGCCGCGACGT
CGACGCTGATCGTGTCGTTCTTCTACCTGCTCGCGCAGATGGCGGGCGCGGGTGGTCTCGTCGCGCTGCTGCTCGGCGTC
GAAGGCAAGGGCGCGCAGGCACTGGTGATCGCCGTCGTCGGCGTGATCATGATCGCCTACGTGCTGATCGGCGGCATGAA
GGGCACCACCTGGGTGCAGATCATCAAGGCCGCGCTGCTCATCGTCGGCGCGCTCGTGATCACGCTCTGGGTGCTCGGCA
AGTACGGCTTCAACTTCTCCCAGCTGCTGCAGGCCGCGGTCGACAAGGCGGGCAAGGCCGGGCAGACGTTGCTCGGCCCG
GGCAAGCAGTACGGCGCCACCGGAACGTCCAAGCTCGACTTCCTCTCCCTCGGCATCGCGCTGGTGCTGGGCACGGCGGG
CCTGCCGCACGTCCTGATGCGCTTCTACACCGTGCCGACCGCCCGCGACGCCCGTCGCTCGGTGGTCTGGGCGATCGTGC
TGATCGGCGTGTTCTACCTGTTCACGCTGGTGCTGGGCTACGGCGCCGGTGCGCTGGTCGGGCCGGACACGATCAAGAAG
GCACCGGGCGGGGTCAACTCCGCGGCTCCGCTGCTCGCGCTCGAACTGGGCGGGCCGGTGCTGCTGGGCCTGATCTCCGC
GGTCGCCTTCGCGACGATCCTCGCGGTGGTCGCCGGCCTGACGATCACGGCCTCGGCGTCCTTCGCCCACGACGTCTACG
CGAACGTCGTCAAGCGGGGCAAGACGTCGCCGGACTCGGAGGTCAAGGTCGCCCGGATCACCGCGGTGGTGATCGGCGCC
CTCGCCATCGGCGGCGGCATCCTGGCCAACGGGCAGAACGTGGCGTTCCTGGTCGCGCTGGCCTTCGCGGTCGCGGCGTC
GGCGAACCTGCCGACGATCCTCTACTCGCTGTTCTGGAAGCGGTTCAACACCCAGGGCGCGCTGTGGTCGATCTACGGCG
GCCTGGCCATCACGATCGTGCTGATCGTCTTCTCGCCGGCGGTGTCCGGCAAGAGCACGTCGATGATCAAGAGCGTGGAC
TTCGCCTGGTTCCCGCTGAGCAACCCGGGCCTCGTTTCGATCCCGGCCGCGTTCATCCTGGGCTGGCTGGGCACGGTCCT
GTCCAAGGAGCACAACGAGAAGAAGTACGCCGAAATGGAGGTCCGCTCCCTGACCGGCGCGGGCGCCGAGAAGGCCGTGG
TCCACTAA

Protein sequence :
MTNIAAGVEGSNPLLNILIFAAFVLITLVIVFRASRNTKTASDYYAAGRAFTGPQNGIAISGDYLSAASFLGIAGAIAIN
GYDGFLYSIGFLVAWLVALLLVAELLRNTGKFTMGDVLAFRMKQRPVRAAAATSTLIVSFFYLLAQMAGAGGLVALLLGV
EGKGAQALVIAVVGVIMIAYVLIGGMKGTTWVQIIKAALLIVGALVITLWVLGKYGFNFSQLLQAAVDKAGKAGQTLLGP
GKQYGATGTSKLDFLSLGIALVLGTAGLPHVLMRFYTVPTARDARRSVVWAIVLIGVFYLFTLVLGYGAGALVGPDTIKK
APGGVNSAAPLLALELGGPVLLGLISAVAFATILAVVAGLTITASASFAHDVYANVVKRGKTSPDSEVKVARITAVVIGA
LAIGGGILANGQNVAFLVALAFAVAASANLPTILYSLFWKRFNTQGALWSIYGGLAITIVLIVFSPAVSGKSTSMIKSVD
FAWFPLSNPGLVSIPAAFILGWLGTVLSKEHNEKKYAEMEVRSLTGAGAEKAVVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 8e-105 64
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 1e-47 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMED_1584 YP_003763799.1 solute:Na+ symporter BAC0564 Protein 2e-55 44
AMED_1584 YP_003763799.1 solute:Na+ symporter BAC0570 Protein 4e-48 43