Gene Information

Name : smpB (AMED_1253)
Accession : YP_003763470.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1332836 - 1333318 bp
Length : 483 bp
Strand : +
Note : -

DNA sequence :
ATGCCCAAGGAACGTGGCCAGAAGGTGATCGTGTCGAACCGCAAGGCGCGGCACGATTACTCCATCCTCGACACCTACGA
GTGCGGTCTCGTGCTCGTCGGCACCGAGGTCAAGAGCCTGCGCGAGGGCAAGGCGTCACTGGCGGACGCGTTCGCGACCG
TCGACGACGGTGAAGTGTGGCTGCGCAACGTGCACATCCCGGAGTACACGCAGGGCACGTGGACCAACCACATGCCGCGG
CGCACCCGGAAGCTGCTGCTGCACCGGCGGGAGATCGAGAAGCTCATCGGCAAGACCAAGGAGAGCGGGCTCTCGCTGGT
GCCGCTGTCGATGTACTTCAAGGACGGCAAGGTCAAGGTCGAAATCGCCCTGGCGCAGGGCAAGAAGGCCTACGACAAGC
GGCAGACGCTGGCGAAGCGCGACGCGGACCGGGACATCAGGAAGGCCATGGGCCGCGCGTTGAAGGGCCGGTTCACGGAG
TGA

Protein sequence :
MPKERGQKVIVSNRKARHDYSILDTYECGLVLVGTEVKSLREGKASLADAFATVDDGEVWLRNVHIPEYTQGTWTNHMPR
RTRKLLLHRREIEKLIGKTKESGLSLVPLSMYFKDGKVKVEIALAQGKKAYDKRQTLAKRDADRDIRKAMGRALKGRFTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 4e-48 63
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-33 51
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-23 41