Gene Information

Name : glnA (AMED_1229)
Accession : YP_003763446.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1306866 - 1308290 bp
Length : 1425 bp
Strand : -
Note : -

DNA sequence :
GTGCCCACTACTCCAGACGACATCCAGCGCCTCATCGCCGACGAGGACGTCGAAGTCATCGACGTCCAGTTCTGCGACCT
GCCCGGCGTGATGCAGCACTTCACGGTCCCCGCGAAGGCCTTCACCGAAGAGGCCTACGAAGAGGGTCTCGCGTTCGACG
GCTCCTCGGTGCGCGGCTTCCAGTCCATCCACGAGTCCGACATGCTGCTGCTGCCGGACGCGGCGACCGCGCGGATCGAC
CCCTTCCGCAAGGCGAAGACGCTCGCCCTCAACTTCTTCGTGCACGACCCCTTCACCCGTGAGGCGTACAGCCGCGACCC
GCGCAACATCGCGCGCAAGGCCGAGCAGTACATCGCCGAGTACGGCGTCGCCGACAACGTCTACTTCGGTCCCGAAGCCG
AGTTCTACATCTTCGACTCGATCCGCTTCGACTCCGCCGAGCACGCCTCCTTCCACGAGATCGACTCCGTCGAGGGCTGG
TGGAACACGGGCGCCGACGAGGTCGGTGGCAACCAGGGCTACAAGACGAAGTTCAAGGGCGGCTACTTCCCGGTCCCGCC
GGTCGACCACTTCGCCGACCTGCGCGACGACATCGTCCGCAACCTCCAGGGCTCCGGTTTCGAGATCGAGCGCGCGCACC
ACGAGGTGGGCACCGCCGGCCAGACCGAGATCAACTACAAGTTCAACACGCTGCTGCACGCCGCGGACGACCTGCAGCTG
TTCAAGTACATCGTGAAGAACACGGTGTTCGCCGCGGGCAAGACGGCCACGTTCATGCCGAAGCCCCTCGCCGGCGACAA
CGGCTCGGGCATGCACTGCCACCAGTCGCTGTGGAAGGACGGCCAGCCGCTGTTCCACGACGAGTCGGGCTACGCCGGCC
TGTCGGACACCGCGCGCCACTACATCGGCGGCCTGCTCAAGCACGCCCCGAGCCTGCTGGCCTTCACGAACCCGACGGTG
AACTCCTACCACCGCCTGGTCCCGGGCTTCGAGGCGCCGGTTTCGCTGGTCTACTCGCAGCGCAACCGCTCGGCCTGCGT
CCGCATCCCGATCACGGGCAACAACCCGAAGGCCAAGCGCGCCGAGTTCCGCTGCCCGGACTCGTCGGGCAACCCGTACC
TGGCGTTCTCGGCGATGATGATGGCCGGCCTCGACGGCATCCGGAACAAGATCGAGCCGCCGGAGCCGATCGACAAGGAC
CTCTACGAGCTCCCGCCCGAGGAGGCCAAGGACGTCAAGCTGGTCCCGGGCGACCTGGGCACAGTCCTGAACACGCTCGA
GGCGGACCACGACTACCTCCTCGAGGGCGGCGTGTTCACCCCGGACGTGATCGAGACGTGGATCTCGTACAAGCGCGAGA
ACGAGATCGACCCGCTGCGCCTGCGCCCGCACCCGTACGAGTTCTCCCTGTACTACGACGTGTGA

Protein sequence :
MPTTPDDIQRLIADEDVEVIDVQFCDLPGVMQHFTVPAKAFTEEAYEEGLAFDGSSVRGFQSIHESDMLLLPDAATARID
PFRKAKTLALNFFVHDPFTREAYSRDPRNIARKAEQYIAEYGVADNVYFGPEAEFYIFDSIRFDSAEHASFHEIDSVEGW
WNTGADEVGGNQGYKTKFKGGYFPVPPVDHFADLRDDIVRNLQGSGFEIERAHHEVGTAGQTEINYKFNTLLHAADDLQL
FKYIVKNTVFAAGKTATFMPKPLAGDNGSGMHCHQSLWKDGQPLFHDESGYAGLSDTARHYIGGLLKHAPSLLAFTNPTV
NSYHRLVPGFEAPVSLVYSQRNRSACVRIPITGNNPKAKRAEFRCPDSSGNPYLAFSAMMMAGLDGIRNKIEPPEPIDKD
LYELPPEEAKDVKLVPGDLGTVLNTLEADHDYLLEGGVFTPDVIETWISYKRENEIDPLRLRPHPYEFSLYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-86 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_003763446.1 glutamine synthetase VFG1399 Protein 2e-177 73