Gene Information

Name : Nwat_0876 (Nwat_0876)
Accession : YP_003760143.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 911313 - 912005 bp
Length : 693 bp
Strand : -
Note : KEGG: noc:Noc_2214 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGAACGCTATGGTCGAAATCCGCCATCTCAGCAAATCCTACTGGCGGGGTAATCAGAGAGTTCCGGTCCTCGATAATAT
CAACCTGACAATTGCGGAAGGGGAATTTATTGCCCTCATGGGGCCGTCCGGTTCGGGGAAAAGCACCCTGCTGAATTTAG
TGGCGGGTATCGACACGCCTGATGGCGGCAGCCTGACGATCAATGGCATCGATATTACCACCCTGTCCGAGGGGGCACTT
GCCCAATGGCGGGCCGAGCATGTGGGTTTTATTTTTCAGTTCTATAATTTGATGCCGGTCCTTACCGCTTTTGAAAACGT
GGAACTGCCGCTACTATTGACTGCATTATCCCGCAAGGAGCGGCGGGAACATGCGGAATTGGTACTCGCCATCGTGGGCC
TTCGCGATCGGATGGACCATTACCCCTCCCAACTCTCCGGTGGACAGCAGCAACGGGTCGCCATTGCCCGGGCGGTGGTC
ACTGACCCCACCCTGATCGTCGCCGACGAGCCCACGGGGGACCTAGATCGGGAGTCGGCCCAGGAGATTTTAAACCTCTT
GCAACAACTCAATCGGGAGCTCCATAAAACCGTGGTGATGGTCACCCACGATGAACTGGCCGCCAAGCGCGCCCATGTCA
TCCGGCACTTGGACAAAGGGGTGCTGGACGATCACAACCTCTTCCCTTCCTAG

Protein sequence :
MNAMVEIRHLSKSYWRGNQRVPVLDNINLTIAEGEFIALMGPSGSGKSTLLNLVAGIDTPDGGSLTINGIDITTLSEGAL
AQWRAEHVGFIFQFYNLMPVLTAFENVELPLLLTALSRKERREHAELVLAIVGLRDRMDHYPSQLSGGQQQRVAIARAVV
TDPTLIVADEPTGDLDRESAQEILNLLQQLNRELHKTVVMVTHDELAAKRAHVIRHLDKGVLDDHNLFPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 44
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_0876 YP_003760143.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-47 49
Nwat_0876 YP_003760143.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-39 46
Nwat_0876 YP_003760143.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-43 43
Nwat_0876 YP_003760143.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-37 41