Gene Information

Name : Nwat_0787 (Nwat_0787)
Accession : YP_003760061.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 815763 - 818354 bp
Length : 2592 bp
Strand : -
Note : TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: noc:Noc_0919 DNA mismatch repair protein MutS; SMART: DNA mismatch repair prot

DNA sequence :
ATGCCAGCAAATGACCCTCAGAAACCCCATACACCCATGATGCAACAGTATCTGCGGATTAAGGCAGAATATCCCGCTAC
CTTGCTGCTGTACCGCATGGGGGACTTTTATGAATTATTCTATGACGATGCTCAACGCGCTGCGGAATTGCTGGATATTA
CGCTGACTAGCCGCGGGCAGTCAGCCGGCGAGCCCATCCCCATGGCTGGGATTCCCTATCATGCATTGGATTCCTATTTG
GCAAGACTGGTTCGCCAAGGGGAGTCGGTAGCCATCTGCGAGCAGGTAGGCGATCCGGCAACAAGCAAGGGTCCCGTGGA
GCGTCAAGTGGCGCGAATCATCACTCCAGGAACGGTGACTGAAGAAGCTCTCTTGGAAGCCCGCCGGGATAATCTGCTGG
CCGCGCTCCAAAGAGAGGGGGATGTTTTTGGCTTTGCCGTGCTTGATCTTTGCAGTGGGCGCTTTAATATTTTAGAAGTA
GCTAGTGAATCGGCGACTATCAGCGAACTGGCCCGCATTCGGCCAGCGGAACTTTTGGTGAGCGAAGACCTGGCGCTTAC
CCTGGTCGATTCCAAAACTGACGCGGTGGTGCGGCCTTTGCCTCCCTGGCATTTTGATAGGGAAAGTGCCCAGCGCCAGC
TATGCCAGCAATTTGGGACTCAGAACCTGGCCGGTTTTGGCTGCGAGGAAATGAAAACCGCAATTGCCGCCGCCGGATGC
TTACTGCATTATGTTCAGGATACCCAGCGCGCCCACCTTCCCCACATTCACGCGCTCCAAGTAGAGCGCCAAGAAACCAG
CATTATTCTGGACCCCAGCACCCGGCGCAACCTGGAATTAGAAGAAAGCCTGAGCGGCCATTCAAACCATAATACCTTAA
TCGCGGTGCTGGACCGAACGGCAACCGCCATGGGTAGCCGCCTGCTACGGCGCTATCTCCACCGTCCTCTGCGAGATCAA
ACCCTGCTCAAACAACGCCAACAGGCGCTGGCTGCCCTCCTAGAAGGAGGACTGACCGATATTTTACAAAAATTACTTCG
AGGAATAGGCGATATTGAACGCATTCTCTCCCGCGTAGCCCTGCGTTCCGCCCGCCCGCGAGATCTCGTCCAGCTCCGGC
AAGCCTTGGGGCTATTGCCTAAAATCCGAGAGAGCTTGTTGCAGTTAAACAGAGACAGTATCTTACTTCAGTCGCTACAA
GAAGATTTGGGTCCCTTTCCCAAGCTCCATGAGCTGCTACAACGGGCTATTTGCGAAAACCCGCCGGTGCTCATTCGAGA
TGGCGGGGTCATCGCTCTCGGTTTTGACTCCGAACTGGATGAATTGCGGCATTTAAGCGGCAATGCTGGGCAATTTTTAG
TAGAATTGGAGCAGCGGGAACGGGAACGCACAAAAATCCCGACTCTTAAGATAGGCTACAACAAAGTTCATGGCTACTAT
CTTGAGATCACGCGTGCTCAGGCTCATCAAGCGCCTCCTGACTATATCCGCCGCCAGACCTTAAAAGGAGCGGAACGCTA
CATTACCCCGGAATTAAAAGGCTTTGAAGACCAGGTATTAAGCGCCCGGGAACGGGCGTTGGCGCGGGAAAAAGCCCTTT
ACGAGGGGCTGTTGGAACAATTTATGGAACCGCTTCCCGCTTTGCGCGCCTGCGCCAATGCCTTGGCGGAGTTAGATGTT
CTCCATAACCTAGCCGAGCGGGCTAAAACCCTAGAGTATGTGGTCCCCCTATTGAGCGATCAACCAGGGATATTGATCGA
AGAGGGCCGCCATCCCGTGGTGGAACAAACCTTAGAGAATCCTTTTGTGCCTAATGATCTGACTCTCCAGGAAACACGGC
GGATGCTGATCATTACCGGTCCTAATATGGGAGGAAAATCTACCTATATGCGCCAGACGGCCTTAATTGTCCTGCTCGCC
CATATTGGCAGCTTTGTACCCGCCCGCCGGGCTGTCATCGGCCCTATTGACCGGATTTTTACCCGTATTGGCGCAGCCGA
TGATCTTGCCGGGGGACGCTCCACCTTTATGGTGGAAATGACCGAGACCGCCAACATTTTGCATAATGCCACCCAGTACA
GTTTGGTCCTGCTGGATGAGGTTGGCCGGGGCACCAGCACTTTCGATGGCCTCTCTCTCGCCTGGGCGGTGGCCTCCTAC
TTGGTAAACAACGCGCGTTCCCTAACGCTATTTGCAACCCATTACTTTGAACTCACCGCTCTTCCCGAGCATCTTGACGG
CGTGGCTAACCTTCACCTTACGGCAACCGAGCACAAGGAACGTATCGTTTTTCTCCATGCAGTGAAAGAGGGACCCGCCA
GCCAAAGCTATGGTCTTCAGGTAGCCGCGCTGGCGGGTGTTCCCCAGGAAGTCATTGCCCAAGCGCGGCAGCGGCTTATG
AAATTGGAAAGTAATGCTGAGCAAAAATCCACCCATGGAGACGGCGCTCAACTAGACTTGCTTGCGCTCTCCGCAGAGCA
TCCCGCCGTTCAAATACTACGGGAGTTAGATCCAGATGAACTCACTCCCCGGCAAGCTTTAACGAAACTTTACGAACTCA
AACAGCTATTAGACCTCGCTGGTACCCGCTAG

Protein sequence :
MPANDPQKPHTPMMQQYLRIKAEYPATLLLYRMGDFYELFYDDAQRAAELLDITLTSRGQSAGEPIPMAGIPYHALDSYL
ARLVRQGESVAICEQVGDPATSKGPVERQVARIITPGTVTEEALLEARRDNLLAALQREGDVFGFAVLDLCSGRFNILEV
ASESATISELARIRPAELLVSEDLALTLVDSKTDAVVRPLPPWHFDRESAQRQLCQQFGTQNLAGFGCEEMKTAIAAAGC
LLHYVQDTQRAHLPHIHALQVERQETSIILDPSTRRNLELEESLSGHSNHNTLIAVLDRTATAMGSRLLRRYLHRPLRDQ
TLLKQRQQALAALLEGGLTDILQKLLRGIGDIERILSRVALRSARPRDLVQLRQALGLLPKIRESLLQLNRDSILLQSLQ
EDLGPFPKLHELLQRAICENPPVLIRDGGVIALGFDSELDELRHLSGNAGQFLVELEQRERERTKIPTLKIGYNKVHGYY
LEITRAQAHQAPPDYIRRQTLKGAERYITPELKGFEDQVLSARERALAREKALYEGLLEQFMEPLPALRACANALAELDV
LHNLAERAKTLEYVVPLLSDQPGILIEEGRHPVVEQTLENPFVPNDLTLQETRRMLIITGPNMGGKSTYMRQTALIVLLA
HIGSFVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTETANILHNATQYSLVLLDEVGRGTSTFDGLSLAWAVASY
LVNNARSLTLFATHYFELTALPEHLDGVANLHLTATEHKERIVFLHAVKEGPASQSYGLQVAALAGVPQEVIAQARQRLM
KLESNAEQKSTHGDGAQLDLLALSAEHPAVQILRELDPDELTPRQALTKLYELKQLLDLAGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_0787 YP_003760061.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 61