Gene Information

Name : Nwat_0315 (Nwat_0315)
Accession : YP_003759606.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 325498 - 327171 bp
Length : 1674 bp
Strand : -
Note : KEGG: noc:Noc_2773 ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase

DNA sequence :
GTGTTACTCCAAGTCGAACACCTGAAAACTTACCTCCAAGCCGGTAATGAAACCGTTAAGGCGGTAGATGGAATAAATTT
TACCATCGAGCGGGGGGAAACCTTCTGTTTGGTCGGGGAATCGGGTAGTGGCAAATCAGTCACCGCCCTGTCCGTGATCC
AGTTATTACCCAAGGATATCAGCCACCATCCTGAAGGGCGCATCTTGCTCGATTGGCGACGGGATAAACAGCGCCAGGGG
CCGGTGGATCTGCTGCGCCTGCCAGAAACCTGCAAGCAAAACATCCGCGGCGCCCGCATCGCTATGATTTTCCAAGAGCC
TATGACCTCCCTCAACCCCGTTTTCACGGTGGGCGAGCAAATCATGGAAACCTTACAACTCCACTTCCCCGGTATGGAAG
AGAGCGAGGCGCGGGAGCGGGCCGTGGCCGCCCTGGCCCAGGTGCAAATTCTAAACCCGGAACTGCGCATTGAAGAATAT
CCCCATCGACTCTCTGGCGGCCAGCGCCAGCGGGTCATGATTGCCATGGCCATGGCCTGCGAGCCGGATCTGCTCATTGC
CGACGAACCCACTACGGCCCTGGACGTTACCGTCCAGGCCGAAATTCTGCGCTTGATGCGCGAACTGCAAGCACGGCGAA
ATATGGGCATCCTGTTCATTACCCATGACTTTGGAGTAGTCTCCCAGATGGCCCGCCGATTAGCGGTGATGCGGTTAGGG
AAAATCGTCGAGTCTGGCCCCCTGGATGAGATCCTGCACCGCCCTCAACACCCCTACACCCGCCAACTCCTGGCTGCCCT
GCCCGAGAATCTCAAGCGCCAACAAGCCGCGGCGAGAAAGAGCAACAAAGGCACGCCGCAGCCCTCAGATATGGGCGGGC
AATCACCCTTACTGGAGCTACGCGGCCTGGAGGTGCATTTTCCCATCCGTAAAGGGGTACTGCGGCGGGTCGTGGATCAT
GTCCGGGCCGTGGATGGAGTAGATATGGCTATTCCAGCAGGGCAAATTCTAGCACTGGTGGGCGAGTCGGGCTGCGGCAA
AACCACGTTGGGACGGGCCATACTCCGCCTGGTAGAGCCTACCGGCGGCCAAGTCTATTACGCGGGCACCGATCTGACGG
CATTGAAGCCCAGGGAACTGCGCCGCTACCGGCAAGCGCTGCAAATCATCTTTCAGGACCCTATGTCCTCCCTCAATCCA
CGCCTTTCCATCGCTGCAACCTTGACCGAGCCCATGGGAATCCACGGCATCGGAAGTTCCCGCGAGGAACGCCTCGAGCG
GGCCAGCACCGTGCTAGAGCGAGTCCAGCTTAAGGCCGATTATTTATGGCGCTACCCCCACGAGTTCTCCGGCGGTCAGC
GCCAACGTATCGCCATTGCTCGGGCGCTGGTGCTAGAACCCCGGTTTATCGTCTGTGATGAAATCACCAGCGCCCTGGAT
GTATCGGTACAGGCCGAAATTCTGCAACTGCTATTGGAATTGCAGCGGGAACGCCACCTCACCCTGCTATTTATTACCCA
TAACATCGCCGTAGTAGAATATCTTAGCAACCAAATTGCGGTGATGCGTGATGGCCGTATCGTTGAACAAGGCCCTACCG
ACCAAGTCTGCCGAGCACCCACGCACCCTTATACACAAAAACTGCTAGCGGCGGTGCCACGGGTCCCTCTGTAG

Protein sequence :
MLLQVEHLKTYLQAGNETVKAVDGINFTIERGETFCLVGESGSGKSVTALSVIQLLPKDISHHPEGRILLDWRRDKQRQG
PVDLLRLPETCKQNIRGARIAMIFQEPMTSLNPVFTVGEQIMETLQLHFPGMEESEARERAVAALAQVQILNPELRIEEY
PHRLSGGQRQRVMIAMAMACEPDLLIADEPTTALDVTVQAEILRLMRELQARRNMGILFITHDFGVVSQMARRLAVMRLG
KIVESGPLDEILHRPQHPYTRQLLAALPENLKRQQAAARKSNKGTPQPSDMGGQSPLLELRGLEVHFPIRKGVLRRVVDH
VRAVDGVDMAIPAGQILALVGESGCGKTTLGRAILRLVEPTGGQVYYAGTDLTALKPRELRRYRQALQIIFQDPMSSLNP
RLSIAATLTEPMGIHGIGSSREERLERASTVLERVQLKADYLWRYPHEFSGGQRQRIAIARALVLEPRFIVCDEITSALD
VSVQAEILQLLLELQRERHLTLLFITHNIAVVEYLSNQIAVMRDGRIVEQGPTDQVCRAPTHPYTQKLLAAVPRVPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 7e-86 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-69 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-69 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 9e-69 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-69 41