Gene Information

Name : Nwat_2897 (Nwat_2897)
Accession : YP_003761960.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 3082678 - 3084099 bp
Length : 1422 bp
Strand : -
Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: noc:Noc_0223 DnaB helicase; SMART: AAA ATPase

DNA sequence :
ATGCCGGAACTCGCCTACCAGGAAAAGAAAGATCAATTCGTCGAAGGGCTAAAAATTCCTCCCCATTCGATGGAGGCCGA
GCAATCGGTATTAGGAGGGTTATTACTCGATAATCAAGCGTGGGAGCAGATCGCCGACATTCTGGATTCGAAGGATTTCT
ACCGCCAGGACCACCGTCTCTTATTTCTTTCTATCGGTGAGATGCTTGAACAATCCCGGCCTTGCGATGTGGTGACCCTC
TCCGAGTGGCTTAAAAATAAACGGTTACTGGAAGAAACAGGCGGTTTAGCCTATCTCACGAATCTGGCCCGCAATACCCC
TACTGCCGCTAATATCAAGGCCTATGCCGAGGTCGTCCGGGAGCGTTCGGTGTTGCGCCAGCTTATCCGGGTGGGCACTG
ATATTGCTGGCAGTGCCTATCAGCCGGAAGGGCGAGAGAGCGGGGAATTGTTAGATGAAGCCGAGAAGCGGGTCTTTGAA
ATTGCCGAGCAAGGCGCCCGCGGCCAGCGGAGTTTTGTCAACATAAAAAATCTGCTTGGTAAGGTGGTGGATCGGATTGA
TCACCTGTTCGAGCAGGATAGTCCCATTACGGGACTATCCTCTGGCTTTGCGGATTTCGACCTGCTGACTTCTGGTCTTC
AGCCATCGGATTTGATTATTGCCGCGGGTAGGCCCTCCATGGGAAAAACCACCTTTGCCATGAATATTGCTGAGCATGTG
GCGATTAAGCGCCGGGTTCCCGTGGCGGTATTTAGCATGGAAATGCCAGGAGAGCAGCTAGCCATGCGCATGATGTCTTC
TCTGGGACATATTGATCAACATCGCGTCCGGACAGGCCGCCTGGAGGATGACGATTGGCCGCGCCTCACCTCGGCGATCA
GCCTATTGACCGAGGCGCCGCTTTTTATTGACGATACGCCAGCTCTTTCCCCGACCGAACTGCGGGCGCGGGCTCGGCGG
CTGATGCGGGAGCAAGATGGCCTGGGTTTGATCCTCATTGATTATTTGCAGCTAATGCAGGTGCCGGGACATCGGGAAAA
CCGGGCGACTGAAATCTCTGAAATTTCACGTAATCTCAAGGCGGTAGCCAAGGAGCTCAAAGTTCCCGTGCTGGCCCTCT
CCCAGCTTAACCGGAGCCTGGAACAACGGCCTAATAAGCGGCCGGTAATGTCGGATTTACGTGAATCCGGTGCTATTGAG
CAGGATGCGGACGTGATAGTATTTATCTATCGCGATGAAGTTTATAATGAAGAAAGTCCTGATCGGGGAACGGCGGAAAT
CATTGTTGGCAAGCAGCGTAATGGTCCCATTGGAACCGTGCGCCTCACTTTCCGTGGCCAATATACCCGTTTTGAAAATT
ATGTGCAGGATGCCTATGGAGCAGGTTCTGGGTTCCCGGCCGCGGGTAATAAGATGAATTAA

Protein sequence :
MPELAYQEKKDQFVEGLKIPPHSMEAEQSVLGGLLLDNQAWEQIADILDSKDFYRQDHRLLFLSIGEMLEQSRPCDVVTL
SEWLKNKRLLEETGGLAYLTNLARNTPTAANIKAYAEVVRERSVLRQLIRVGTDIAGSAYQPEGRESGELLDEAEKRVFE
IAEQGARGQRSFVNIKNLLGKVVDRIDHLFEQDSPITGLSSGFADFDLLTSGLQPSDLIIAAGRPSMGKTTFAMNIAEHV
AIKRRVPVAVFSMEMPGEQLAMRMMSSLGHIDQHRVRTGRLEDDDWPRLTSAISLLTEAPLFIDDTPALSPTELRARARR
LMREQDGLGLILIDYLQLMQVPGHRENRATEISEISRNLKAVAKELKVPVLALSQLNRSLEQRPNKRPVMSDLRESGAIE
QDADVIVFIYRDEVYNEESPDRGTAEIIVGKQRNGPIGTVRLTFRGQYTRFENYVQDAYGAGSGFPAAGNKMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-99 53
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 4e-92 50
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-92 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 9e-93 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-85 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-85 48
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 8e-88 48
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-88 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 4e-76 42