Gene Information

Name : Nwat_0260 (Nwat_0260)
Accession : YP_003759551.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 269739 - 271613 bp
Length : 1875 bp
Strand : -
Note : KEGG: noc:Noc_2828 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAGCGCTATTCCAGAAGAATTTATGTCCACCCAAGCTCAGGTGGACAAGCAAGCCATCCAGCCCTTTCCCAATTCACG
CAAAATCCATGTTACGGGTAGTCGCCCTGATATTCGCGTCCCCATGCGGGAAATCGCGCTTTCCGACACCCATACGAGTC
AGGGGCGAGAAAAAAATCCTCCCTTAACCGTCTACGATACTTCTGGCCCTTATACGGACCCGGAAACCAAAATTGATATC
CGCCAAGGTCTGCCAGAGCTCCGCCGAAACTGGATTGAAGAACGAGCGGATAGCGAAATATTACCTGATCTTTCCTCCCG
ATACGGTCGACAGAGAAATGCTGATTCCAAGCTGGATTCCTTACGCTTTGTCCATTTACGCCCACCCCGCCGAGCCAAGG
CTGGTCATAATGTAAGCCAGATGCATTACGCCCGGCAAGGGATCATCACTCCAGAAATGGAATTTATTGCTATCCGCGAG
AACCAGCGCCTGGAGCAATATCGGGAGCAGCTTGCCCAGCACCATCCCGGGCAGTCATTCGGTGCCCATCTACCGTCCCG
GCTAACTCCCGAATTTGTACGCTCGGAAGTCGCTCGCGGCCGCGCCATTATCCCAGCTAATATCAACCATACCGAGTTGG
AACCCATGATTATCGGGCGTAATTTCTTGGTCAAGATTAATGCCAATATTGGCAACTCCGCCGTAACCTCTAGCATTGCC
GAGGAAGTGGATAAAATGACCTGGGCCATTCGCTGGGGCGCCGACACGGTGATGGATCTTTCCACTGGCAAAAATATCCA
CGAAACACGGGAATGGATAGTACGCAACTCTCCCGTCCCCATTGGCACCGTGCCTATTTACCAGGCCCTCGAAAAAGTGG
GGGGAAAAGCCGAAGAGCTGACCTGGGAGATCTTCCGCGACACCTTAATTGAACAAGCCGAACAGGGGGTGGATTATTTC
ACCATTCACGCCGGGGTGCGTCTGGCCTATGTGCCCCTAACCGCCAAGCGAGTCACCGGTATCGTCTCCCGGGGCGGCTC
CATCATGGCCAAATGGTGCCTTGCTCATCACACGGAAAGTTTCCTCTACACCCATTTTGAGGAAATTTGCGAAATCATGA
AAGCTTACGATGTTTCTTTCTCCTTAGGAGATGGACTGCGACCCGGCTCCCTTGCCGATGCCAACGACGCAGCCCAATTT
GCCGAGCTTGAAACCCTGGGGGAACTCACCGAGATTGCTTGGAAACATGATGTTCAGACTATGATTGAAGGCCCGGGCCA
TGTCCCCATGCACCTTATTAAGGAAAATATGGACAAACAGTTGGCTTGTTGTGGCGAAGCGCCTTTCTACACCTTGGGAC
CTTTAACCACTGACATTGCGCCAGGCTACGACCACATCACTTCTGGTATCGGCGCGGCCATGATCGGCTGGTACGGCACT
GCCATGCTCTGTTATGTCACTCCCAAGGAGCACCTGGGATTACCCAATAAAAACGACGTCAAGGAAGGCATTATTACTTA
CAAAATTGCGGCCCACGCTGCCGACCTAGCCAAAGGACATCCCAGCGCCCAAATCAGGGACAATGCCATGTCCAAAGCGC
GGTTTGAGTTTCGCTGGGAAGATCAATTCAACATTGGTTTAGACCCTGATCAGGCGCGGGAGTATCATGACGAGACCTTA
CCCAAGGACTCGGCCAAAGTAGCCCACTTCTGTTCCATGTGCGGTCCTCAGTTCTGCTCCATGAAGATCTCCCAGGATGT
GCGCGAATATGCCAAACAAAAGGGCCTAGAGCACCATACCGCCCTAGAGCAAGGCATGGCGGAAAAAGCCCAGGAATTCA
GGGAAAAGGGTGCGGAGATTTACCACCAGACCTAA

Protein sequence :
MSAIPEEFMSTQAQVDKQAIQPFPNSRKIHVTGSRPDIRVPMREIALSDTHTSQGREKNPPLTVYDTSGPYTDPETKIDI
RQGLPELRRNWIEERADSEILPDLSSRYGRQRNADSKLDSLRFVHLRPPRRAKAGHNVSQMHYARQGIITPEMEFIAIRE
NQRLEQYREQLAQHHPGQSFGAHLPSRLTPEFVRSEVARGRAIIPANINHTELEPMIIGRNFLVKINANIGNSAVTSSIA
EEVDKMTWAIRWGADTVMDLSTGKNIHETREWIVRNSPVPIGTVPIYQALEKVGGKAEELTWEIFRDTLIEQAEQGVDYF
TIHAGVRLAYVPLTAKRVTGIVSRGGSIMAKWCLAHHTESFLYTHFEEICEIMKAYDVSFSLGDGLRPGSLADANDAAQF
AELETLGELTEIAWKHDVQTMIEGPGHVPMHLIKENMDKQLACCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGT
AMLCYVTPKEHLGLPNKNDVKEGIITYKIAAHAADLAKGHPSAQIRDNAMSKARFEFRWEDQFNIGLDPDQAREYHDETL
PKDSAKVAHFCSMCGPQFCSMKISQDVREYAKQKGLEHHTALEQGMAEKAQEFREKGAEIYHQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 73
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 73
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 72