Gene Information

Name : Nwat_2550 (Nwat_2550)
Accession : YP_003761658.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Virulence
Product : Fis family sigma-54 specific transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3829
EC number : -
Position : 2735038 - 2736009 bp
Length : 972 bp
Strand : +
Note : KEGG: noc:Noc_0537 sigma-54 specific transcriptional regulator, fis-type; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase

DNA sequence : 
ATGGATGGGTTTGATTCACTGATTGGTAAAGCGCCGGCTTTCGAAGCCCTTTTGCGCAGCGCACGCATGGTGGCGGCCAC
AGAGGTGACCGCACTCATTATAGGAGAAACGGGAACAGGTAAAGAGCTGTTGGCACAGGCCATTCATGCCGAGAGCCAGC
GGGCAAACAAAGCATTTGCAGCCATTAACTGCGCGGCACTGCCGGAAGGGCTAGCCGAATCAGAACTTTTTGGCCATCGC
CGTGGCGCTTTCTCTGGCGCCATCCATGACCATTTGGGACGTTTTCGGGCTGCCGAAGGAGGTACCGTATTCCTGGATGA
AGTCAACGAGCTCTCTCCTGCCATTCAAGCTAAGCTGCTCCGCTTCCTGGAATCGGGCGAATGCCAGGCCATTGGCGATA
CGCGGGTCCAACACTGCGATGTACGGGTTATCGCTGCCACTAATTGCAATCTAAACCAACGAATCCAGGAAGGACGGTTT
CGCCAAGATCTTTACTACCGCCTCCATGTGGTGCCCTTGGAGATACCACCCTTGCGGGCACGGGAAGGAGATATCCACAG
GCTTTTAAAGCACTTTTGCGCCGTCTTTGCTCAGCACCACCACGGCCTTACGCCAGCGGGCTTTAATGCGGCTGCCTTAC
GGGTTCTCAACCTCTATTCCTGGCCCGGCAATGTGCGGGAATTGCGTAATTTTTGCGAGCGCATGATGGTGCTATTGCCG
GGCCAAATTGTTACCCCTCAAAATCTGCCCTTTAACATTCGCGGCGACTTGAATCTGCTGCCAGAAAAGGGGGAAAAACC
ACTGATCACCTTGCCAGAAAGCGGTTTAGAACTTGATCGGGTAGAGATGGAACTCATTCACCAAGCCATCGCCAAAACCA
AGGGTAATCGCGCTAAAGCCGCGCGGCTGTTGGGTATTAGCCGCGATACGCTCTGTTATCGGCTGCAGAAATACACCCTT
CAAACCAATTAA

Protein sequence : 
MDGFDSLIGKAPAFEALLRSARMVAATEVTALIIGETGTGKELLAQAIHAESQRANKAFAAINCAALPEGLAESELFGHR
RGAFSGAIHDHLGRFRAAEGGTVFLDEVNELSPAIQAKLLRFLESGECQAIGDTRVQHCDVRVIAATNCNLNQRIQEGRF
RQDLYYRLHVVPLEIPPLRAREGDIHRLLKHFCAVFAQHHHGLTPAGFNAAALRVLNLYSWPGNVRELRNFCERMMVLLP
GQIVTPQNLPFNIRGDLNLLPEKGEKPLITLPESGLELDRVEMELIHQAIAKTKGNRAKAARLLGISRDTLCYRLQKYTL
QTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAC35800.1 transcriptional regulator Virulence Hrp PAI Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_2550 YP_003761658.1 Fis family sigma-54 specific transcriptional regulator BAC0467 Protein 1e-57 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_2550 YP_003761658.1 Fis family sigma-54 specific transcriptional regulator VFG0116 Protein 1e-48 43