Gene Information

Name : Nwat_0248 (Nwat_0248)
Accession : YP_003759539.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 259299 - 260108 bp
Length : 810 bp
Strand : -
Note : KEGG: noc:Noc_2840 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence :
ATGTCCTACAAAGTCATTATTCCCGCCCGTTATGGCGCTAGCCGCCTACCAGGTAAGCCACTGCTCGATTTAGCGGGTAA
ACCCATGTTGCTGTATGTTGTGGAAAAAGCTCAGAAAAGCGGTGCTGGAGAAGTCTTGGTTGCCACTGATGATAGGCGTA
TAGAAGCAATTGCCCAAGGCCATGGTGTACAAGTCTGTATGACCTCAATCCAACATGACTCTGGGACTAACCGCTTGGCG
GAAGTAGTAACGCATAAAGACTATCCAGATCAAACCATTATCATCAATGTTCAGGGTGATGAGCCTCTTTTACCTCCTTC
GCTGATTGCTCAGACAGCAGAAGACCTAGAGACCCATCCCGAGGCGGATATTGCTACCTTATGTGTACCTATTGCTAACC
AAGAGGAGTTGTTTGATCCTAATATCGTCAAAGTAGTTCGGGATACACAAGGCTATGCCCTTTACTTCAGCCGGGCTCCC
ATTCCTTGGGCAAGAGAAGACTTTGCCGCTAAAACCACTGAAAGCAGTTGGCCTACCTCCTGTCCTTATTATCGCCATAT
CGGACTTTACGCTTATCGCGCGGGTTTCTTACGGCGCTATCCCCGACTTCCTGCCTCCCCCTTGGAACAGGCCGAATGCT
TGGAGCAATTGCGGGTTTTATACCATGGAGGTCGCATTCATGTGGCTATCGCCGGTACAATTCCTCCTCCAGGGGTGGAC
ACCCTGGCTGATTTGGAACGGGTGAGGCAACTACTAGCCCAAGAAAAAATTACAACTAAAAATGAAGCACAATCCAGCGA
TATTATTTAA

Protein sequence :
MSYKVIIPARYGASRLPGKPLLDLAGKPMLLYVVEKAQKSGAGEVLVATDDRRIEAIAQGHGVQVCMTSIQHDSGTNRLA
EVVTHKDYPDQTIIINVQGDEPLLPPSLIAQTAEDLETHPEADIATLCVPIANQEELFDPNIVKVVRDTQGYALYFSRAP
IPWAREDFAAKTTESSWPTSCPYYRHIGLYAYRAGFLRRYPRLPASPLEQAECLEQLRVLYHGGRIHVAIAGTIPPPGVD
TLADLERVRQLLAQEKITTKNEAQSSDII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 8e-43 47
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 1e-42 47
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-42 47