Gene Information

Name : Nwat_2323 (Nwat_2323)
Accession : YP_003761472.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Virulence
Product : putative two component sigma54 specific transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2525822 - 2527189 bp
Length : 1368 bp
Strand : -
Note : KEGG: noc:Noc_0785 fis family two component transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase

DNA sequence : 
ATGAAGCAAATGACTGAAAATAACAGAGTTTTATTGGTAGACGATGATCGCGATTTATTGTCGTTACTCTCTATGCGTTT
AGAGAACGGTGGCTACGAGCCTGTTAAAGCGGGAAGCGGAGAAGAAGCGCTAGCCCAGGTGGAATTAGCCCGTCCCCACG
CCGTGATCACGGATTTGCGAATGGGAGGCATGGATGGGATGGCGTTAGCGGATTGCATTCACCGCAAAAACCCAGCATTA
CCGGTGATCATTCTTACCGCCCATGGTTCTATTCCTGATGCGGTGCAGGCCACTAAAAATGGAGTTTTTGCTTTTCTGAC
CAAGCCTTATAATAGCCGGGAGCTATTGAGCCAATTGGAAAAGGCGCTTCGCGTTTCCGGTATTTGCCACGATTCGGAAG
CCCCTCCCCCAGAGAGTTGGCGTGAGGAAATTATCACCCGCAGCCCCTTGATGGAGGATCTACTCAGTCAGGCCCGGCTG
GTGGCCGAAAGCGAGGCCAGTATTTGTTTACGGGGGGATAGTGGCACAGGCAAAGAGTTACTGGCTAAAGCTATTCACAA
GGCAAGCCCGCGTAGCAAACAACCCTTTATTGCTGTTAACTGCGCGGCTATTCCGGAGTTATTGTTGGAATCTGAGTTAT
TTGGCCACGCCAAGGGCGCATTTACCGGCGCAACTCGGGATCATCCAGGATTATTTCAGGCTGCTCATGGTGGCACCTTG
TTTTTAGATGAAATTGGCGATATGCCACCTGCTCTCCAGGTAAAATTGCTGCGAGCTCTACAAGAGCAGCAAGTACGGCC
AGTAGGAAATACCTCTACGGTAAAGGTGGATGTACGCATTATTTCGGCCACCCACAAAGATCTGGATGCGGAGGTGCGGG
ATGGTAACTTCCGGGAGGATCTTTATTATCGGCTTAATGTTGTGATTTTGGAGATTCCCTCTCTCGCTGAACGGCGGGAA
GATATCCTGTTTCTTGCCAATCATTTTCTACTCACCTTTCGGCGCGGGAGCAAAAAAAACATTCGAGGATTTTCGGCTGA
AGCAATCGAGTTATTGGTGAGTGCCCCTTGGCCTGGCAATGTTCGTCAGCTATGTAATGTGGTGGAACAAACCGTGGTTT
TGTCGACCACACCTATCATTTCCGCCAAGCTAGTAAAAAAAGCGCTGCGCCAGCAATCAGGTCAATTTCCTTCCTTTGCT
GATGCGCGAAGGCAATTCGAGCAGGAATATCTTGCGGGTCTACTTAAAATTACCGATGGTAATGTGACTCGGGCGTCCCG
GTTAGCCCGGCGTAATCGCACCGATTTTTATAAACTTCTCCAACGTCATACTCTGGACCCCGCCGATTTTAAGCCTGCCA
AATCTTAG

Protein sequence : 
MKQMTENNRVLLVDDDRDLLSLLSMRLENGGYEPVKAGSGEEALAQVELARPHAVITDLRMGGMDGMALADCIHRKNPAL
PVIILTAHGSIPDAVQATKNGVFAFLTKPYNSRELLSQLEKALRVSGICHDSEAPPPESWREEIITRSPLMEDLLSQARL
VAESEASICLRGDSGTGKELLAKAIHKASPRSKQPFIAVNCAAIPELLLESELFGHAKGAFTGATRDHPGLFQAAHGGTL
FLDEIGDMPPALQVKLLRALQEQQVRPVGNTSTVKVDVRIISATHKDLDAEVRDGNFREDLYYRLNVVILEIPSLAERRE
DILFLANHFLLTFRRGSKKNIRGFSAEAIELLVSAPWPGNVRQLCNVVEQTVVLSTTPIISAKLVKKALRQQSGQFPSFA
DARRQFEQEYLAGLLKITDGNVTRASRLARRNRTDFYKLLQRHTLDPADFKPAKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-61 43
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-61 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_2323 YP_003761472.1 putative two component sigma54 specific transcriptional regulator BAC0467 Protein 8e-81 52
Nwat_2323 YP_003761472.1 putative two component sigma54 specific transcriptional regulator BAC0089 Protein 7e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_2323 YP_003761472.1 putative two component sigma54 specific transcriptional regulator VFG1214 Protein 3e-64 48
Nwat_2323 YP_003761472.1 putative two component sigma54 specific transcriptional regulator VFG0116 Protein 2e-59 43
Nwat_2323 YP_003761472.1 putative two component sigma54 specific transcriptional regulator VFG1249 Protein 7e-62 43