Gene Information

Name : Nwat_2202 (Nwat_2202)
Accession : YP_003761355.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 2398969 - 2400411 bp
Length : 1443 bp
Strand : -
Note : SMART: AAA ATPase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; KEGG: noc:Noc_2356 flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region

DNA sequence :
GTGGCTGAAGTCGTTTCCAAACCTCCTTTACTGGGAAGGCGCTGGCAGCATGCCCTAGCTGGGTGCAGGGAGCGTTTAGC
CCGAGATGCAGCCCCTTTGGTTACGGTTGAGGGGCGACTTACCCGAATGGTGGGATTGACCTTGGAGGCAGTAGGATGTC
AACTGCCAGTAGGAGGGCGTTGCCATATTCTGAGGCAGGAAAGGTTGCCTGTGGAAGCCGAAGTGGTTGGATTTGCCGGA
GAAAGGCTTTTTTTAATGCCTATCGGTGATCCGCGGGGATTGGTGCCCAATGCCCCTGTTATTCCCCTTCGTCATGGGGG
TAGGATGGCGGTTGGAGAGGCGTTGCTGGGCCGGGTTTTGGATGGCGGGGGACGTCCTTTGGACGATTTAGGCCCTCTTC
GCGCTACCCATCGCGTTTCGCTGGAGGGGCAGCCCATCAATCCCTTGGCACGGCAGCCTATTAGAGAGCCTATGGATGTA
GGGGTAGCCGCAATCAATGCTTTGCTGACCATTGGCCGGGGTCAACGGATGGGGCTATTTGCTGGTAGCGGGGTAGGTAA
AAGCGTCTTGCTTGGAATGATGACCCGCTATGCTAAGGCCGATGTTATCGTGGTGGGGTTGATTGGCGAGCGTGGCCGGG
AAGTCCAGGAGTTTATTGAAAATATTCTGGGCAAGGAGGGCCTGGCACGCTCCGTAGTGGTGGCAACCCCGGCGGATCAT
TCTCCCTTGATGCGTATTCACGGCGCAATGCTGGCGACTAGTATTGCTGAATATTTTCGAGATCAAGGCAAACAGGTGCT
GCTATTAATGGATTCTCTGACTCGTTTTGGCCATGCCCAACGGGAGCTGGCTCTGGCTATTGGTGAGCCGCCAGCAACTC
GCGGTTACCCTCCCTCTGTATTTGCCAAAATTCCCCAATTGCTGGAAAGGGCGGGCAATGGACGCTCGGGCAGCGGCAGT
ATTACCGCTTTTTATACGGTTCTCACCGAAGGGGACGATCCTAATGATCCCGTGGCTGATTCGGCACGAGCCATTCTGGA
TGGTCATATCGTATTGTCCCGGCGCTTAGCGGAAGCGGGCCATTACCCGGCCATTGACATTGAGGCCTCGATTAGCCGGG
TGATGAGTCAGATTACGGTGCCAGAGCACCAGCAAGCTGCTCAGCAGTTTAAGCAAATTTATTCTCTATATAGCCAGAAC
CAAGATCTTATCAGTGTGGGCGCCTATAGCCGTGGCAGTGATTCCCGGCTTGATGAGGCGGTTGATAAACAACCTCAATT
CCGTTCATTTTTGCAACAAGATATGTCCCGGTCATTCTCTGTGGAGGAGAGCCTGGAAAGGCTTCAGCAGGCTTTAAAGG
CAAAGCCAACGCCAAAAGTGGCGGTACCTGCAGTCAATGCTGGGGGAGTTTCCAGGCAATTTAATAATGGAGGCTATTCG
TGA

Protein sequence :
MAEVVSKPPLLGRRWQHALAGCRERLARDAAPLVTVEGRLTRMVGLTLEAVGCQLPVGGRCHILRQERLPVEAEVVGFAG
ERLFLMPIGDPRGLVPNAPVIPLRHGGRMAVGEALLGRVLDGGGRPLDDLGPLRATHRVSLEGQPINPLARQPIREPMDV
GVAAINALLTIGRGQRMGLFAGSGVGKSVLLGMMTRYAKADVIVVGLIGERGREVQEFIENILGKEGLARSVVVATPADH
SPLMRIHGAMLATSIAEYFRDQGKQVLLLMDSLTRFGHAQRELALAIGEPPATRGYPPSVFAKIPQLLERAGNGRSGSGS
ITAFYTVLTEGDDPNDPVADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRVMSQITVPEHQQAAQQFKQIYSLYSQN
QDLISVGAYSRGSDSRLDEAVDKQPQFRSFLQQDMSRSFSVEESLERLQQALKAKPTPKVAVPAVNAGGVSRQFNNGGYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-84 51
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-85 51
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-83 50
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-83 50
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-84 50
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-84 50
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-84 50
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-80 50
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-80 50
lscN AAO18044.1 LscN Virulence TTSS locus Protein 5e-82 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-73 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-73 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-73 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-73 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-73 48
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-77 48
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 6e-63 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 6e-63 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-72 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-66 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-66 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 8e-67 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-64 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 8e-67 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-66 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 6e-65 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-63 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-65 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 8e-67 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 6e-63 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 6e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG2331 Protein 2e-107 65
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-122 63
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG2499 Protein 6e-113 63
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG0192 Protein 4e-82 49
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG0048 Protein 3e-78 49
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG0515 Protein 1e-73 48
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG0390 Protein 1e-80 47
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-80 46
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG2459 Protein 5e-68 42
Nwat_2202 YP_003761355.1 flagellar protein export ATPase FliI VFG1008 Protein 6e-64 41