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Name : Nwat_2113 (Nwat_2113) Accession : YP_003761267.1 Strain : Nitrosococcus watsonii C-113 Genome accession: NC_014315 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2313061 - 2314953 bp Length : 1893 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; KEGG: noc:Noc_2281 polysaccharide biosynthesis protein CapD DNA sequence : GTGCCAAAGCGTGGAATCGGCCCTTTTTTGCAGGCCCAAAAGCGGCGGGCCGTGGTTATTGTGCATGATGTTACTGCCGT CTGTTTGGCCTGGGTGCTAAGCTATCTTATTCGTTACAATTTGTCGCCTTATTGGGTGGACTGGGAGACTTGTCTCAGTA CCTTGCCGGTGATCGTGGTGGTCCAAAGCATCGTTTTGATTTGGATAGGGCTTTATCGGGGCTTGTGGCGTTTTGCAAGT ATTCCTGATTTATTAAATATCATTCGCGCCGTAGGTTACGGGGCCCTTTTAGTTGCGCTAACGCTTTTTCTTATCAACCG TCTTAACGGTGTACCCCGCAGTGTATTGATGCTTTATCCTGTCTTTTCTTTGCTTTTGCTAGCCGGTCCCCGGCTTGCTT ATCGGGTGTGGAAAGATCGCCGTCTTACCTTGGCCTCAAATCCTCACCGAAAACGAGTCCTGATTTTAGGGGCTGGTCGT GCCGGTGATTTGCTGGTCCGCGATATGCTTGTGGAGGGTCACTACTTGCCGGTGGCTTTTCTAGATGATCGGCCTGATCT GATAGGCCGGCAAGTGCGAGGAATTCCGGTCGTGGGGTTGTTAGCACAATTGCCTGCCAAGGTGGGGGAGATGGCCGCAG ATGTGGTAGTGATTGCGATGCCTTCTGCTAATAATCGGCAGATGCGTCGTGCTGTTTCGCTCTGCGAGCAGGCACAGGTA TCTTATCGGACTTTACCCCGCCTGCAAGATTTGGTTGCGGGTCGGGCAAGCATCAAGGAGCTTCGAGAGGTTGCTATTGA TGATTTGCTGGGGCGGGATGAAATATTTTTGGATTGGGATTATATCCGCCAGGATTTGGAAGCCAAATCCCTGCTAGTCA GCGGCGGAGGAGGATCGATCGGCTCCGAGCTTTGCCGGCAATTAGGGCGCCTTGGGCCAGCTTCTCTTGTTGTCATCGAT AATAGCGAGTATAAGCTCTATCGTCTCGAGCAGGAGTTGCGGCGGAAACTTCCGGCTCTCAATCTCCATGCTTATTTATG TGATGTGCGTGATGAAGCTGGCGTGAAGGAGATCCTGGCGTGTCATTCACCAGAGGTGGTGTTTCATGCAGCAGCTTATA AGCATGTACCTCTCCTAGAGAGGCAGATACGGCAGGCCGTGCGGAACAATGTTTTTGGAACCCGCTGTTTAGCCGAGGCG GCAAGGCAAGCAGGTTGTGGAACTTTCGTCCTGATTTCAACCGACAAAGCGGTTAATCCAACCAGTGTGATGGGCGCCAG CAAGCGGGTTGCGGAACTTCTCTGCCAAGATCTTAATCGACACAGCCAAACTCGGTTTATCGTTGTGCGTTTTGGCAATG TGCTTGGATCAGCAGGGAGCGTAGTGCCGTTATTTCAGGCCCAAATTGCCGCCGGTGGGCCGGTCACGGTGACCCATCCT GAAATGACCCGCTATTTTATGACTATTCCCGAAGCATGCCACCTGATTACCCAAGCCGCTATGATAGGCAAGGGAGGGGA AATATTCGTCTTGGATATGGGCGAGTCGGTTAAAATTATCGAGCTTGCTGAGCAAATGATCCGTCTTTCTGGCCAGGAAC CGGAGGTGGAGATCATTTATACGGGGCTGAGACCAGGGGAAAAGCTTCATGAGGAATTATTTTATGCCCATGAATCTCCC GTCCCTACCCCATCGCCGAAGATACTGCTAGCGCGGCATGGTGCTACTGACTGGAGGCGATTGGAAAGCGGATTGGATGA GTTAGAAAAAGCCTGTGAGCTGGGAGAGGAATGGCAGGTGAAGCAGGTGTTAGGGCGCCTATTGCCGGAGGTGAGGGTAG AGGCTGAATTGCAACAGGTGGGTTCTAAAGCAATCGCAATCAACAGGAGTTAA Protein sequence : MPKRGIGPFLQAQKRRAVVIVHDVTAVCLAWVLSYLIRYNLSPYWVDWETCLSTLPVIVVVQSIVLIWIGLYRGLWRFAS IPDLLNIIRAVGYGALLVALTLFLINRLNGVPRSVLMLYPVFSLLLLAGPRLAYRVWKDRRLTLASNPHRKRVLILGAGR AGDLLVRDMLVEGHYLPVAFLDDRPDLIGRQVRGIPVVGLLAQLPAKVGEMAADVVVIAMPSANNRQMRRAVSLCEQAQV SYRTLPRLQDLVAGRASIKELREVAIDDLLGRDEIFLDWDYIRQDLEAKSLLVSGGGGSIGSELCRQLGRLGPASLVVID NSEYKLYRLEQELRRKLPALNLHAYLCDVRDEAGVKEILACHSPEVVFHAAAYKHVPLLERQIRQAVRNNVFGTRCLAEA ARQAGCGTFVLISTDKAVNPTSVMGASKRVAELLCQDLNRHSQTRFIVVRFGNVLGSAGSVVPLFQAQIAAGGPVTVTHP EMTRYFMTIPEACHLITQAAMIGKGGEIFVLDMGESVKIIELAEQMIRLSGQEPEVEIIYTGLRPGEKLHEELFYAHESP VPTPSPKILLARHGATDWRRLESGLDELEKACELGEEWQVKQVLGRLLPEVRVEAELQQVGSKAIAINRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 8e-84 | 43 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-84 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nwat_2113 | YP_003761267.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 7e-80 | 42 |
| Nwat_2113 | YP_003761267.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-83 | 41 |
