Gene Information

Name : Nwat_2087 (Nwat_2087)
Accession : YP_003761241.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2285517 - 2286434 bp
Length : 918 bp
Strand : -
Note : KEGG: noc:Noc_2255 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence :
GTGATAAGCTCCGAACAGGCCTGCCTCGCAGCCGATCAGGAGCACCTAGAGCGTTTTCTGGATACCTTATGGTTAGAAGA
GGGATTGGCGGAAAATACTCTAGCGGCTTATCGCCGTGATCTAGAGGGATTTTCCCGCTGGTTGGATTCTCAGGGACGGG
CCCTGATTAGGGCGCAGCGGGAAGATGTGCTGGCCTATTTAGCGCACCGCCTGGAAGGGGGTGGTAAATCTAGAAGTGTT
GCCCGCTCAGTTTCTAGCCTGCGCCGTTTTTACCGTTATCTCATGAGGGAGAAAATCCGCGATAGCGACCCTAGCGACCG
TGTGGAGCTTCCCCGACTTGGAAGGCTTTTGCCTGAGTCTTTGAGTGAAGGGGAAGTAGAAGCCTTATTAGCCGCCCCCA
AGACTAATGATAGCCTGGGGCTGCGAGATCGAACCATGTTGGAAACTTTATATGCTACCGGGTTGCGGGTTTCTGAATTA
GTTAATTTAACCCTGTCTCAATTGAATTCCCGGCAGGGAGTAGTCCGTTTAAGCGGTAAAGGCAATAAAGAGCGTCTGGT
GCCTTTAGGAGAAGTCGCGCTGAGCTGGCTTGATCGTTATTGCCATGAAGCCCGTCCAGGATTAGTTAGGGGTCAGCTTA
ATGAAATACTATTCCTGACCCGGCGCGGCGGGGCCATGAGCCGGCAAGCTTTTTGGTACTTGATCAAGCGCTATGCCCGC
CAGTCTGGTATCCAAAAGACCCTTTCACCTCATACCTTGCGCCACGCGTTTGCCACTCACCTTTTAAATCATGGGGCGGA
TTTGCGGGTAGTGCAAATTTTGCTTGGGCATGCAGACCTTTCGACTACACAAATTTACACTCATGTGGCTAGGGCTCGTT
TGCAACAGCTTCACCAGCAGCATCATCCGCGCGGCTAA

Protein sequence :
MISSEQACLAADQEHLERFLDTLWLEEGLAENTLAAYRRDLEGFSRWLDSQGRALIRAQREDVLAYLAHRLEGGGKSRSV
ARSVSSLRRFYRYLMREKIRDSDPSDRVELPRLGRLLPESLSEGEVEALLAAPKTNDSLGLRDRTMLETLYATGLRVSEL
VNLTLSQLNSRQGVVRLSGKGNKERLVPLGEVALSWLDRYCHEARPGLVRGQLNEILFLTRRGGAMSRQAFWYLIKRYAR
QSGIQKTLSPHTLRHAFATHLLNHGADLRVVQILLGHADLSTTQIYTHVARARLQQLHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-59 63
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-59 63