Gene Information

Name : Nwat_1407 (Nwat_1407)
Accession : YP_003760640.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Unknown
Product : IS1 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 1541132 - 1541578 bp
Length : 447 bp
Strand : -
Note : PFAM: IS1 transposase; KEGG: sdy:SDY_4540 iso-IS1 ORF2

DNA sequence :
TTGAAGCGTTTGCCTGCAGAGCAGGTAGAAGTGCAGGTGTTGCGGGTTGAGGAAGCGGAAGTCGATGAAATGTGGAGTTT
TGTGGGAAAGAAAACTAACCCACGCTGGTTGTGGCATGCCATCGATCATCGCAGTGGGCAGGTGCTGGCCTACGTTTTGG
GAACCCATCAAGATACCGTCTTTTTGAAACTCAAAAGACTTCTTGAACCTTTTGGAATCACCCATTTTTATACCGATGAC
TGGGGCACGTATCAGCGCCATCTGGACAGTAAGAGACACCACATCGGCAAACAACATACCCAAAAAATAGAAAGAAAACA
TCTCACCTTGCGCACCCGCATTAAACGATTGGCACGCAAAACGATCTGCTTTTCCAAAACACGCCAAATGCATGATATTG
TCATTGGGCTTTTTATTAATCGATATGAATTTGGTGTGCAAGTGTAA

Protein sequence :
MKRLPAEQVEVQVLRVEEAEVDEMWSFVGKKTNPRWLWHAIDHRSGQVLAYVLGTHQDTVFLKLKRLLEPFGITHFYTDD
WGTYQRHLDSKRHHIGKQHTQKIERKHLTLRTRIKRLARKTICFSKTRQMHDIVIGLFINRYEFGVQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 1e-19 43
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 1e-19 43
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 1e-19 43
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 2e-18 42
Z1562 NP_287066.1 hypothetical protein Not tested TAI Protein 4e-19 42
Z1123 NP_286658.1 hypothetical protein Not tested TAI Protein 4e-19 42
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-18 42
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-18 42
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 6e-19 42
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 1e-18 42
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 1e-18 42
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_1407 YP_003760640.1 IS1 transposase VFG0612 Protein 7e-18 41