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Name : Nwat_1306 (Nwat_1306) Accession : YP_003760553.1 Strain : Nitrosococcus watsonii C-113 Genome accession: NC_014315 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1414766 - 1417924 bp Length : 3159 bp Strand : + Note : TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: maq:Maqu_3386 HsdR family type I site-specific deoxyribonuclease; SMART: DEAD-like helicase DNA sequence : ATGACCGAAGAGCAACTGGAACAACAATGCTTGCAATGGTTCGCCGAAGGCGGCTGGGAGATCGCCCATGGACCGGATCT GGCGCCGGATGGCGAGGCCCCGGAACGGGCCGATTACCGGCAGGTGTTGTTGCTGGCGGATCTTGAGGCGGCCATAAAGC GCATCAATCCTCACCTGTCCCAGAGCGCCGTTGAGCAGGCTATCGCCGTGGTGCGCAAGCCGGAAAGCCTGGATGTGGTG ATCAGCAATCGGGTCTTCCACCGCCTGCTGCTGAATGGCGTACCCGTTGAGTACAAGCACGACGACAAGCTGGTTCACGA CCGGGCATTGCTGGTGGATTTCAGAGATCTCACCGCCAACCGCTTCCGGGCCATTAATCAGTTCACCCTCGCAGGCTCCC GGCAACTGCGCCGGCCGGATGTGATCTGCTTTATCAACGGCTTACCTCTGGCCGTGCTGGAGCTGAAAAGCCCCGGCGCC GAGAACGCGAACATCTGGGATGCCTACCACCAGATCCAGACCTACAAGGACGAAATCCCCGACCTATTCGCCTATAACGA GGCAGCCATCATCAGTGACGGCTATGGGGCCCGGGTAGGCTCTCTCACCGCCAGCCAGGAGCGCTACATGCCCTGGCGCA CAATCAAGCACGAGGACGACAAGCCCCTGCTGGAGTGGCAGTTAGAAACCATGGTGCGGGGCTTTTTCGACCGGGAACTG TTCCTGGATTACCTTCGCTACTTCGTGATCTTCGAGGCCGACTCGGACAAGCTGATTAAGAAGATTGCCGGCTACCATCA GTTCCATGGGGTGCGCGAAGCGGTAAAGGCCACGGTGATTGCCGCCCAAGCGCCGGAGCAAGGTTACTGGGCCAAAGAAA AACGCGCTACCTACGGCGATGAGGTGCAGCCAGGGAGCAAAAAGGCCGGGGTAGTGTGGCATACCCAGGGCTCTGGTAAG AGCCTTTCCATGTGCTGTTACGCCGGCAAGTTGCTGCAACAGCCCGGGATGAACAACCCCACCCTGATGGTGGTGACCGA TCGCAACGATCTGGACGGCCAACTGTTCGCCACCTTTAGCGCCGCCCGGGAATTGCTTAAACAGGAGCCGGTACAAGCCG ATGACCGGGATACCCTGCGGCGGTTGCTGTCGGAACGGGAATCCGGCGGGATCATCTTCACCACGGTGCAGAAGTTCGCC CTGCTGAATGATGAGACCGGCCACCCGGTGCTGAATGACCGCCACAACATCGTGGTGATCTCCGATGAAGCCCACCGCAG CCAGTATGGCCTGAAAGCTACCCTCAAGCGAGACGGCAGCTACACGTTCGGTTATGCCCGCCACCTGCGCGATGCCCTGC CCAATGCCTCGTTCATTGGCTTCACCGGCACCCCCATTGAGCGCGAAGACAGGGACACCCGCGCCGTGTTCGGTGATTAC GTCTCCATCTACGACATCCAGGATGCCGTGGACGATGGCGCGACGGTACCCATCTTCTATGAATCCCGCTTGGCCAAGCT GGACCTCAACCGGGACCTGATCGGGGAACTGTCCGAGCAGGTAGAGGAAATGGTTGAAGACGATGAAGACGTGGGCAGCC GCGAGAAAACCAAGGGCGAGTGGAGCCGCCTGGAGAAACTGGTAGGTGCTGGCCCGCGTCTGAAGCAGGTGGCGGAAGAC CTGGTCAGCCACTTTGAAACCCGCTCCCGTACCCTCAGCGGTAAAGCCATGATTGTGGCTATGAGCCGGGAGATTTGCGT GCATCTGTATAACGAGATAGTCGCCCTGCGCCCGGCATGGCACGACGATGATCCGGAGAAAGGCGCCATCAAGGTTGTGA TGACTGGCTCCGCCTCGGATCGGGCCTTGCTGCAACCCCATATCTATAACAAGCAGACCAAAAAGCGGTTCGAGAAGCGC TTCAAGGACAGCAACGATTCGCTCAAGCTGGTGATCGTGCGGGATATGTGGCTGACCGGGTTCGACGCGCCTTGTTGCCA CACCATGTACGTGGACAAGCCCATGAAGGGCCATAATTTGATGCAGGCCATTGCCCGGGTCAACCGGGTGTTCAAGGACA AGCCCGGTGGGCTGGTGGTGGACTACATCGGCATTGCCAACGAACTCAAGCAGGCCCTGAAAACCTACACTGATGCCAAG GGCAAGGGTTCCCCCACTCACAGCGCGGAAGAAGCCTACGCCATTTTGCTGGAGAAGCTGGCCATCATCCACGGCCTGTT CGCACCTGGCCCGCAAGGCCAGGGCTTCAACTACAACGGTTTCGAAACCGGGCCCCACAAGTTGCTGGTGCCTACCGCCA ACTATGTGCTCAGTCTGGAAGATGGCAAGAAGCGTTTCTTGGATACCGTGCTGGCCATGAACAAAGCGTTCTCCCTCTGC GCTACCCTGGACGAAGCCCAGGCCCTGCAGAAGGAGGTGGCGTTTTGGTCGCAGGTGAAAATCGCCATCACCAAGTTCAC CAGCGTGGACAAAAAGCTCACCGAGGAAGACAAGAACACTGCCTTGAAGCAGATTCTGGACAACGCCCTGGTGGCCGAAG GCGTGACCGATGTGTTTGCCCTGTGCGGCCTGGACAGGCCCAACATCGGCCTACTCTCGGACGAATTCCTGGAAGACGTG CGGCAAATGCCCTATAAGAATTTCGCCGTGGAGCTGCTGGAAAAACTGCTCAAGGACAACATCAAGGCTAGAACCCGCAG CAACGTGGTGCAGGAGAAGAAATACGCCGACCGCCTGCAAGCAACCCTGCGCCAGTACAACAACCGGGGCATTGAGACGG CACAGGTGATGGAAGAGCTGATTGCCATGGCCAAGCAATTCCAGGCGGAACTGGAGCGCGACGAAGCCCTGGGCCTGAAC CTGGATGAAGTAGCCTTCTACGATGCCCTGGCCAATAATGAAAGTGCGGTGCGAGAGTTGGGTGATGAGACGCTGAAGAA AATCGCCGTGGAAATCACCGACAAGCTGCGCAAATCCACTACCGTCGACTGGCAGGTGCGGGAAAGCGTGCGGGCCAAGC TGCGGATTTTGGTGCGCCGAACGTTACAACGGTACCAATATCCGCCGGACAAGGCTCCGGAGGCGGTCGAACTTATTTTG CAGCAGGCCGAGGTACTATCGGATGAGTGGACAAAATAA Protein sequence : MTEEQLEQQCLQWFAEGGWEIAHGPDLAPDGEAPERADYRQVLLLADLEAAIKRINPHLSQSAVEQAIAVVRKPESLDVV ISNRVFHRLLLNGVPVEYKHDDKLVHDRALLVDFRDLTANRFRAINQFTLAGSRQLRRPDVICFINGLPLAVLELKSPGA ENANIWDAYHQIQTYKDEIPDLFAYNEAAIISDGYGARVGSLTASQERYMPWRTIKHEDDKPLLEWQLETMVRGFFDREL FLDYLRYFVIFEADSDKLIKKIAGYHQFHGVREAVKATVIAAQAPEQGYWAKEKRATYGDEVQPGSKKAGVVWHTQGSGK SLSMCCYAGKLLQQPGMNNPTLMVVTDRNDLDGQLFATFSAARELLKQEPVQADDRDTLRRLLSERESGGIIFTTVQKFA LLNDETGHPVLNDRHNIVVISDEAHRSQYGLKATLKRDGSYTFGYARHLRDALPNASFIGFTGTPIEREDRDTRAVFGDY VSIYDIQDAVDDGATVPIFYESRLAKLDLNRDLIGELSEQVEEMVEDDEDVGSREKTKGEWSRLEKLVGAGPRLKQVAED LVSHFETRSRTLSGKAMIVAMSREICVHLYNEIVALRPAWHDDDPEKGAIKVVMTGSASDRALLQPHIYNKQTKKRFEKR FKDSNDSLKLVIVRDMWLTGFDAPCCHTMYVDKPMKGHNLMQAIARVNRVFKDKPGGLVVDYIGIANELKQALKTYTDAK GKGSPTHSAEEAYAILLEKLAIIHGLFAPGPQGQGFNYNGFETGPHKLLVPTANYVLSLEDGKKRFLDTVLAMNKAFSLC ATLDEAQALQKEVAFWSQVKIAITKFTSVDKKLTEEDKNTALKQILDNALVAEGVTDVFALCGLDRPNIGLLSDEFLEDV RQMPYKNFAVELLEKLLKDNIKARTRSNVVQEKKYADRLQATLRQYNNRGIETAQVMEELIAMAKQFQAELERDEALGLN LDEVAFYDALANNESAVRELGDETLKKIAVEITDKLRKSTTVDWQVRESVRAKLRILVRRTLQRYQYPPDKAPEAVELIL QQAEVLSDEWTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 69 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 44 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 44 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 44 |
