Gene Information

Name : Nwat_1227 (Nwat_1227)
Accession : YP_003760479.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1319941 - 1320600 bp
Length : 660 bp
Strand : +
Note : KEGG: noc:Noc_1354 two comoponent transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGCGCCTGCTGCTGGTGGAAGACAATGTGGCCCTGGCCGATGAACTCTTGCCTTTGTTTAAGGGCTATGGCTACGCGGT
GGATTGGCGGGTGGATGGCCGGGATGCCTTACTGGCGGTTCACGATGAATCTTATGATATGGTCGTTTTAGATCTGGGCC
TGCCGGGCCTGGATGGTCTTCAGGTGCTGCAGCACTGGCGTGCAGAGGGGGTAACTCTGCCGGTGCTGATTCTCACTGCA
CGGGATGCCTGGGCGGAGCGTTTGGAAGGTTTGCGCGCTGGTGCCGACGATTATCTGAGCAAGCCATTCCACCCGGACGA
GTTGCTATTGCGGGTGCAAGCGGTGTTGCGGCGCAGCCATGGCACGGTCAATAGCCCGCGGCTGGAAGCAGGGGGGCTGG
CTCTGGATGAAGATCGGCAGAGTGTTTGGCAGGGGGATCAGGAATACGAACTGACCCGGGGGGAATTTCGTCTATTACGT
TGCTTTATGCTGCACCCGGGCAAGGTGCTTAGCCGGATGGAGCTGAACGAACATCTTTACGATGGTGAAAGCGAGCGGGA
CAGCAATGTATTGGAGGTGCATATTAGTCGGCTACGCCGCAAACTGGGTGACCCAGTGATTGAAACCCGCCGGAGCCAAG
GTTATCGCTTCCAAAAATGA

Protein sequence : 
MRLLLVEDNVALADELLPLFKGYGYAVDWRVDGRDALLAVHDESYDMVVLDLGLPGLDGLQVLQHWRAEGVTLPVLILTA
RDAWAERLEGLRAGADDYLSKPFHPDELLLRVQAVLRRSHGTVNSPRLEAGGLALDEDRQSVWQGDQEYELTRGEFRLLR
CFMLHPGKVLSRMELNEHLYDGESERDSNVLEVHISRLRRKLGDPVIETRRSQGYRFQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-19 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_1227 YP_003760479.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 3e-28 45
Nwat_1227 YP_003760479.1 winged helix family two component transcriptional regulator BAC0487 Protein 4e-20 41
Nwat_1227 YP_003760479.1 winged helix family two component transcriptional regulator BAC0125 Protein 6e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_1227 YP_003760479.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-25 43
Nwat_1227 YP_003760479.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-19 41