Gene Information

Name : Nwat_1162 (Nwat_1162)
Accession : YP_003760417.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1244053 - 1244742 bp
Length : 690 bp
Strand : -
Note : KEGG: noc:Noc_1273 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGATACCGGTACTAGAACTCCTCAACCTTAGTAAATCTTACTGGGAAGGCGAAACCGAGCACCGGGTACTCCATGAGCT
CACCGCTACGATCCAAAAGGGTGAATGTATAGTGCTGCTCGGGCGCAGCGGTTCGGGCAAATCCACCCTCCTTAACCTCA
TTGCGGGTATCGATTTTCCCAGTGCCGGCGAGGTGAACATCAATGGGATATCCTTGACTCGGCTTTCCGAGGAAGATCGC
ACCCTGCTGCGCCGGCGCTATATTGGCTTCATTTTTCAATTCTTCAACCTTATTCCCACGCTTACCGTAGAGGAAAATTT
ATTGCTGCCCCTAGAACTTAACGGTCGCAATAATCCCACGGAACACGCTTATGCTCAGAGCTTGCTGCAAGAAGTTGGCC
TGCTGGAACGAGCCCATAGCTTTCCTGATGAACTCTCCGGGGGCGAGCAACAACGCGTTGCCATTGCCCGCGCCCTGGTC
CACGATCCCTTGCTGGTACTGGCCGATGAGCCAACAGGAAACCTGGATCTGGAAACCGGCCGCCGGGTTCTGGCCCTCCT
AGACCGCCTTACCAAACAACAGGGTAAAACCCTCATCATGGTCACTCACAGCCCGGAAGTAGTTGGACAAGCAGACCGCA
TCCTGCGGTTACGTCCCGAAGGGCTGGTCGCCGAAGAGCCTCCCCAATGA

Protein sequence :
MIPVLELLNLSKSYWEGETEHRVLHELTATIQKGECIVLLGRSGSGKSTLLNLIAGIDFPSAGEVNINGISLTRLSEEDR
TLLRRRYIGFIFQFFNLIPTLTVEENLLLPLELNGRNNPTEHAYAQSLLQEVGLLERAHSFPDELSGGEQQRVAIARALV
HDPLLVLADEPTGNLDLETGRRVLALLDRLTKQQGKTLIMVTHSPEVVGQADRILRLRPEGLVAEEPPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwat_1162 YP_003760417.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-34 43
Nwat_1162 YP_003760417.1 ABC transporter-like protein NC_012469.1.7686878. Protein 7e-35 43
Nwat_1162 YP_003760417.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-32 43
Nwat_1162 YP_003760417.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-27 43
Nwat_1162 YP_003760417.1 ABC transporter-like protein NC_012469.1.7686946. Protein 2e-18 42
Nwat_1162 YP_003760417.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-34 42