Gene Information

Name : Nwat_1073 (Nwat_1073)
Accession : YP_003760332.1
Strain : Nitrosococcus watsonii C-113
Genome accession: NC_014315
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1130746 - 1131861 bp
Length : 1116 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: noc:Noc_2025 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
GTGAACGATAGAGCGTACATGGTTCGGGCTCTGAAGCTAGCCCAGCGCGGTTTATTTACGACTGATCCTAATCCCCGGGT
AGGCTGCGTCCTAGTGCGTGGCGGCGAAATAGTGGGGGAGGGCTGGCATCAACAGGCCGGCGACTCCCATGCGGAAATCA
ACGCCTTGCGCCAAGCAGGTATTCGAGCCCAAGGATCTACTTGTTATGTGACCTTAGAGCCTTGTTGCCACCGAGGACGA
ACCCCCCCCTGCACCGAAGCTTTAATTGAAGCAGGCGTGGCGAGAGTTGTTGCGGCAATGGGAGACCCTCATCCAAAAGT
CGCCAGCCAAGGACTGGCGCAACTTAGAGAGGCTGGTCTTCAAGTGGAGCATGGATTATTGCAGGAAGAGGCCGAGGCCC
TTAACGTGGGTTTTGTCCAACGCTTGGTTCAAGGTCGTCCCTGGGTACGTTGTAAGCTAGCTATGAGTTTGGATGGGGCG
ACGGCGCTAGCTTCTGGAGAGAGTCGTTGGATTACCGCTTCCCCTGCCCGTCGCGATGTGCAGCGGTGGCGGGCCCGCAG
TTCCGCGATCTTAACGGGAATTGGTACTGTCTTGGAAGACGATCCCTCCCTTAATGTCCGCTATGAGGAGTTGGGAGATG
AAGCGCCGCTGGGGTTTAATCGTCAGCCGTTGCGAGTTATTCTGGACCGTCAATTGGCTATTTCGGTGCAGGCTCGGTTG
CTTTCGTTGCCAGGGCCGGTAATGATTGTGTGCGCTGATGCAGCCTCATCTAAAGCGGAATCCTTGCGTTGTAGGGGAGT
GGAAGTGATCAGCCTTCCGGTAACTCCCCAGGGGTTGGATTTGATGGCCTTAATGGCGGCTCTGGCTGCACGGGAAATTA
ACGAGCTTCATGTGGAATGCGGTGCGCGACTGGCGGGCTCGCTGCTCCAGGCCGGTTTAATGGACGAGCTTGTACTGTAC
ATTGCTCCCAAATTGATGGGAGAGGCCGCGTTGGGGTTATTGCAATTGCCTGGCATTCAAACCATGAAGGATTGCATTGA
GGTAGATATTAAAGAAATGCGGGCGGTAGGCCGGGATTGGCGATTAGTGGCTAAGATAGTGCCATCTAGCAGGTAA

Protein sequence :
MNDRAYMVRALKLAQRGLFTTDPNPRVGCVLVRGGEIVGEGWHQQAGDSHAEINALRQAGIRAQGSTCYVTLEPCCHRGR
TPPCTEALIEAGVARVVAAMGDPHPKVASQGLAQLREAGLQVEHGLLQEEAEALNVGFVQRLVQGRPWVRCKLAMSLDGA
TALASGESRWITASPARRDVQRWRARSSAILTGIGTVLEDDPSLNVRYEELGDEAPLGFNRQPLRVILDRQLAISVQARL
LSLPGPVMIVCADAASSKAESLRCRGVEVISLPVTPQGLDLMALMAALAAREINELHVECGARLAGSLLQAGLMDELVLY
IAPKLMGEAALGLLQLPGIQTMKDCIEVDIKEMRAVGRDWRLVAKIVPSSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-57 43
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-57 43