Gene Information

Name : Dehly_0516 (Dehly_0516)
Accession : YP_003758150.1
Strain : Dehalogenimonas lykanthroporepellens BL-DC-9
Genome accession: NC_014314
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 477490 - 478578 bp
Length : 1089 bp
Strand : -
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: deg:DehalGT_0932 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGCAACAGGCCTTGAAACTGGCCGGTCTGGCCCTCGGAGAAGTCAGCCCCAATCCGGCCGTCGGTGCCGTTGTCGTCAA
AGACGACGAAATCGTCGGTCAGGGCTACACCCAACCCCCCGGGCAGGAACACGCCGAGGTCATGGCACTCAACCAGGCCG
GTGCCCGGTCCCAGGGTGCCGTTATGTATGTCACCCTGGAACCCTGCGCCCATCAGGGCCGCACCCCGCCCTGCACCGAT
GCCATCATCGCCGCCGGCATCAAGGAAGTCCATTTCGCCACCCTGGACGACAATCCGGTCGTCTTCGGCAAGGGTAAGGC
GGCGCTGACCGCGGCCGGCATCGAGGTTCACGTCGGTGAACACCGGGACGCCGCCCGAGAACTCAACGAAGCCTATTTCA
AATACATCAATACCGGACTGCCTTTCGTCACCGCCAAGTTCGCCATGAGCCTGGATGGCAAAATCGCCACCCGTACCGGT
GATTCCAAGTGGATTTCCAACGACGAATCCCGAGCTTTCGCCCATTCGCTCCGTCACGAAGCCGACGCTATCATGGCTGG
TGTCGGCACCGTCATCGCCGACAACCCTAAACTGACCGCCAGATGTTGCGCCGGATCGGGTGGCACGTCCCACAAACAGC
CTCTGCGCATCGTCGTCGATTCCCACGGCAGGACGCCGGACACCGCCGTCCTGTTCCATGAACCGGGACGCACCATTCTG
GCTTTCGGCGGGCAGGTATCCGAAGAACGTCGCATCCCGTACACCCAGGCTGGCGCTGAACTGGAGAGCTTCCCGGACGG
CAACGGCCGGGTGGACCTGCCGGCGCTGATGAGCTTTCTGGGCAAACAACAGATAACCAGCGTCATCGTCGAAGGCGGCT
CATCCCTGCTGGGTAGCATGTTCGATGCCGGACTGGTGGACAAGGTCATCGTCTTCATCGCCCCCATGATCATCGGCGGT
GGCGGCGCCCTGACGGCGGTCGGCGGCAACGGCGCTGAAACGCTGGACCAGGCCTGCCGCCTGGAAAAGACTCGTACTTG
GCGTCTCGGTGAAGACACCGTCATCACCGGTTACGTCAACAAGGACTGA

Protein sequence :
MQQALKLAGLALGEVSPNPAVGAVVVKDDEIVGQGYTQPPGQEHAEVMALNQAGARSQGAVMYVTLEPCAHQGRTPPCTD
AIIAAGIKEVHFATLDDNPVVFGKGKAALTAAGIEVHVGEHRDAARELNEAYFKYINTGLPFVTAKFAMSLDGKIATRTG
DSKWISNDESRAFAHSLRHEADAIMAGVGTVIADNPKLTARCCAGSGGTSHKQPLRIVVDSHGRTPDTAVLFHEPGRTIL
AFGGQVSEERRIPYTQAGAELESFPDGNGRVDLPALMSFLGKQQITSVIVEGGSSLLGSMFDAGLVDKVIVFIAPMIIGG
GGALTAVGGNGAETLDQACRLEKTRTWRLGEDTVITGYVNKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-46 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-46 42