Gene Information

Name : Dehly_1312 (Dehly_1312)
Accession : YP_003758923.1
Strain : Dehalogenimonas lykanthroporepellens BL-DC-9
Genome accession: NC_014314
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1290978 - 1293551 bp
Length : 2574 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: ttr:Tter_1216 ATP-dependent chaperone ClpB; SMART: AAA ATPase

DNA sequence :
ATGAATATTGAAAAGTTCACCGAAAAAGCCCAGCAGGCAATTTTCGCCGCCCAACGGCTGGCGGAAGACAGCAGGCACGC
CCAGATAGAAAGCGAACATCTGCTTTTAAGCCTGGTCGCCCAGGAAGGCGGCGTGGTGCCTCAGTTGCTCGGCAAGATGG
GCAATCAGCCGTCCGCGATTGCCGACAAGTTACAGGGTGAATTGGAAAAACTGCCCAAAGCCTACGGCGTAACCCAGGTT
TTTATGTCACCGAATATGAAGCAGATACTGGAAGCGGCTGAAAAGGAAACAGCCAATTTCAAGGATGAGTATACCAGTAC
CGAACATATATTCATCGCCATTCTGGATAAAGACAACCGGGCCGGGGGGCGGATTCTCCGGGAGGCCGGAATTACCAAGG
ACCGGCTGTATCAGGCGCTGACCCAGATCAGGGGCAGTCAGCGAGTCACCGATCCTAATCCGGAGGGTAAATATCAGGCA
CTGGAAAAATACGGCCACGACCTGACAGAGGCCGCCCGCCGCGGCAAGCTTGACCCGGTCATCGGTCGCGACGAAGAAAT
CCGGCGGGTGATACAGGTGCTGTCACGACGCACCAAGAACAACCCGGTACTCATCGGCGAGCCGGGCGTGGGTAAAACGG
CCATCGTTGAAGGCCTAGCCCAGCGTATAGTCAAGGGCGATGTGCCGGAAGGGCTGAAAAACAAACGGCTGGTGTCCCTG
GATATGGGCTCACTGGTGGCCGGCGCCAAGTACCGAGGGGAATTCGAGGAACGTCTTAAGGCGGTGCTGAAGGAAATCCA
GGAAGCCCAAGGCGAATACATTCTGTTCATTGACGAGTTACATACCGTAATCGGCGCCGGTGCCGCCGAAGGCGCCATGG
ACGCTTCCAACATGCTGAAACCGATGCTGGCCAGGGGAGAACTTCATCTCATTGGGGCCACCACACTGGACGAGTACCGC
AAATATGTGGAGAAGGACGCGGCACTGGAACGCCGTTTCCAGCCAGTGTCGGTCAGCGAACCGAGCGTTGAAGATGCCAT
TTCCATTCTACGGGGACTCAAGGAACGTTATGAGGTGCATCACGGCGTGCGCATCAAGGATACGGCGCTGGTAGCGGCGG
CAGTATTGTCCGACCGTTATATCTCCGACCGGTTCCTGCCGGACAAGGCTATTGACCTGGTGGACGAAGCCGCCGCCAAA
CTGCGAACCGAAATAGACAGCGTACCGACCGAACTGGATGAAGTTGAGCGACGCATCATACAACTGGAAATTGAGCGGGA
AGCGCTCAAAAAGGAAAAGGACACCGCCTCACAGGAGCGGCTGGGTAATCTGGAAAAGGAACTGGCCGACCTCAAGGAAA
AAGGCGCCGGGCTCAAGACCCAGTGGCAAAATGAAAAAGAGGATATTCTGAAACTCCAACAGATCAAGGAACAACGGGAA
CAAACCCTTCATGAAATAGAGAAAGCGGAACGCATCGGCGATCTGGAGCGCGCCGCCCGTTTGAAATACACCACCCTGGC
TGAACTGGAAAAACAGCTCAAGGAACAGGAAATCGCCCTGGTCAACGGCAAAGAAGGGCAATTGCTCAAGGAAGAGGTGG
ACGATGAGGATATAGCCGAAGTGGTTGCCCGCTGGACCGGCATTCCGGTCAGCCGGCTGATGGAAGGGGAGATTCAGAAA
CTACTCCAGATGGAGAACCGTCTCCGGCTAAGGTTAGTCGGTCAGGATGAGGCTATCAAGGCAGTAGCCAATTCCATACG
GCGGGCGAGAGCCGGATTGCAGGATCCCAACCGGCCGGTGGGCAGTTTCATTTTCCTGGGACCAACAGGTGTGGGGAAAA
CCGAACTGGCTAAGGCCCTGGCAGAGTTTATGTTCGACGATGAAAAGGCGATGGTGCGGCTGGACATGTCGGAATATATG
GAAAAACACACTGTATCACGTCTGGTCGGGGCGCCGCCCGGATATGTGGGTTATGAAGAAGGAGGCCATCTGACCGAGGC
GGTACGGCGGCGGCCGTATTCGGTGGTGCTGTTGGACGAAATCGAAAAGGCCCACCCCGATGTATTCAATACGTTGCTTC
AAATTCTCGACGACGGACGATTGACCGACGGCCAGGGCCGAACCGTCGATTTCAAGAACACGGTGATCATCATGACCAGT
AACATCGGCAGTCAATGGATTGCCGAACTGGGCACCGGACACGAAGAAGAAATGAAAGATAAAGTCCTGGAAGCGCTGAA
AACCAGTTTCAGACCGGAATTTCTGAACCGGGTGGACGAAATAGTCATTTTCCACCAGTTGAGCTGGGAAAATATCAAAC
GTATCGTCGATATTCAGTTCACCGGTCTGAAGAAAAGACTGGCCGGAAGGCATCTGGAGGTGGAACTGACCGATGAAGCC
AGAGAAAAACTGGCTGAAATCGGCTTCGACCCGGCTTACGGCGCCAGGCCGTTGAAAAGAGCCATCCAGCGTCAGGTACT
GGACCCGCTGGCGGTGGCGGTGCTGGAAGGTCGGTTCAAGGACGGGGAAGTGATAAAGGTGACTGTCCGGGACGGGGACA
TCACCTTCGAATAA

Protein sequence :
MNIEKFTEKAQQAIFAAQRLAEDSRHAQIESEHLLLSLVAQEGGVVPQLLGKMGNQPSAIADKLQGELEKLPKAYGVTQV
FMSPNMKQILEAAEKETANFKDEYTSTEHIFIAILDKDNRAGGRILREAGITKDRLYQALTQIRGSQRVTDPNPEGKYQA
LEKYGHDLTEAARRGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKNKRLVSL
DMGSLVAGAKYRGEFEERLKAVLKEIQEAQGEYILFIDELHTVIGAGAAEGAMDASNMLKPMLARGELHLIGATTLDEYR
KYVEKDAALERRFQPVSVSEPSVEDAISILRGLKERYEVHHGVRIKDTALVAAAVLSDRYISDRFLPDKAIDLVDEAAAK
LRTEIDSVPTELDEVERRIIQLEIEREALKKEKDTASQERLGNLEKELADLKEKGAGLKTQWQNEKEDILKLQQIKEQRE
QTLHEIEKAERIGDLERAARLKYTTLAELEKQLKEQEIALVNGKEGQLLKEEVDDEDIAEVVARWTGIPVSRLMEGEIQK
LLQMENRLRLRLVGQDEAIKAVANSIRRARAGLQDPNRPVGSFIFLGPTGVGKTELAKALAEFMFDDEKAMVRLDMSEYM
EKHTVSRLVGAPPGYVGYEEGGHLTEAVRRRPYSVVLLDEIEKAHPDVFNTLLQILDDGRLTDGQGRTVDFKNTVIIMTS
NIGSQWIAELGTGHEEEMKDKVLEALKTSFRPEFLNRVDEIVIFHQLSWENIKRIVDIQFTGLKKRLAGRHLEVELTDEA
REKLAEIGFDPAYGARPLKRAIQRQVLDPLAVAVLEGRFKDGEVIKVTVRDGDITFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-101 44
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-101 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dehly_1312 YP_003758923.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-103 42
Dehly_1312 YP_003758923.1 ATP-dependent chaperone ClpB VFG2076 Protein 3e-115 41