Gene Information

Name : Dehly_1200 (Dehly_1200)
Accession : YP_003758813.1
Strain : Dehalogenimonas lykanthroporepellens BL-DC-9
Genome accession: NC_014314
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1179349 - 1181880 bp
Length : 2532 bp
Strand : +
Note : KEGG: deb:DehaBAV1_0051 ATPase; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGGCAAGCCGTTTCGACAAGTTTTCAGAACGCGCCCGTCGCGTTTTAACCTACGCCCAGGAAGAGGCGCAGAATCTGAA
CCATAATTACATCGGCACCGAGCATATCCTGCTGGGTATGGTGCGTGAAGAGGACGGCGTCGCCGCCCGGGTACTGGCCA
GCATGGATGTCAACCTGGCCAAGCTACGCTCCGCCGTCGAGTTCGTCATCGGCCGTGGCGAAAAGCCATCCAGCGGTGAA
ACCGGACTGACTTCGCGAGCCAAGAAGGTCATCGAACTGGCCATCGACGAAGCCCGGACGCTCAATCATAACTACATCGG
CACCGAACACCTGCTCCTGGGCCTGCTCCGGGAAGGCGAGGGCGTCGCCGCCGGGGTGCTGGACAGCTTCGGCATCACCA
TTGACAAGACCAGGGCTGAAATCACCCGGGTGCTGTCTCAGGGCGCCATCAACCGGGGCGCACCGCTCAAGGCCGGCGGC
AGAAGCCAGAGCAAGACGCCCAACCTGGACGCCGTATCGCTGGACCTGACCGCCGCCGCCCGGGCCGGCAAGCTGGATCC
GGTGGTCGGCCGACAGAAGGAAATAGACCGGGTTATCCAGATTCTGTCCCGGCGCACCAAGAACAACCCGGCGCTCATCG
GTGAACCCGGTGTCGGCAAGACCGCCATCGTCGAAGGACTGGCACACCGCATCGTGGCCGCTGACGTACCGGAAACGCTG
GAGAATAAGCGGCTGGTATCACTGGACATCGCTTCACTGGTGGCCGGCACCAAGTACCGCGGTGAATTCGAAGAAAGACT
GAAGAAGATTCTGGAAGAACTCAGAGCTTCGGGCAACATTGTTGTTTTCATCGATGAGTTCCATACCATGGTCGGCGCCG
GCGCCGCCGAGGGCGCAGTCGATGCCGCCAATATCATGAAACCCTCGCTGGCCAGAGGCGAAATTCAGATTATCGGCGCC
ACCACGCTGGACGACTACCGTAAGCACGTCGAGCGCGACGCCGCCCTGGAACGGCGCTTCCAGCCGGTGCTGGTGGAAGA
GCCGTCACTGGAAGACACCATCGAGATACTGCGCGGCATCCGCAGTCGTTATGAAGAACATCACCGGCTGGAGATAACCG
ACGATGCGCTGGAAGCGGCGGCCAGTATGGCCTCCCGCTATATCTCCGACCGCTTCATGCCGGACAAGGCCATCGATATC
ATCGACGAGGCTTCTTCCCGCGTGCGTATCCGTCACCGCACCAAGCCGATGCCGCTCAAGGACCTGAAGAAGGCTGAAGA
TTCCTACCGGCGCGACAAAGAGGCGGCGCTGGCTACCCAGCAATATGATTTCGCCGCCGAACTGCGCGAGCGGGAATATC
AGATAGCCGAAAAACGGCGCAAGATGGAAGAAGAATGGCAGGAAGAACAGGGGCAGGCTTTGCCCAAGGTCAGCAAGGAA
GACATCGCCGACGTGGTCAGCATGTGGACCGGCGTACCTCTGCTTCAGCTGACCGGTGACGAAACCGAGCGCCTGCTTCA
CATGGAAGAGGTGCTTCACGAACGCATCATCGGTCAGGAAGAAGCCATCAATACCATCGCCAAAGCCGTTCGCCGGGCCA
GAGCAGGCCTCAAGGACCCGAGCCGGCCTATCGGCAACTTCATTTTCCTGGGGCCGACCGGTGTCGGCAAGACCGAACTG
GCCCGGGCGCTGGCTCAGTTCATGTTCGGTTCCGAGGACAGCATGGTTCGCATCGATATGAGTGAGTTCATGGAGAAGTT
TGCCGTGTCCCGTCTGGTGGGGGCGCCTCCCGGATACGTCGGTTATGATGAAGGCGGCCAGTTGACCGAAGCGGTGCGCC
GCAAGGGTTACTGCCTGATACTGCTGGATGAAATCGAAAAGGCCCACGCCGACGTCTTCAATATTCTGCTCCAGATTTTC
GATGACGGACACCTGACCGACGCCAAAGGCCGGCGGGTGGATTTCCGCAACAGCATCGTCATCATGACGTCCAACATCGG
CGCCGATCTCATCCGAAAAGGCTCCGGCACTATCGGTTTCTCCACCGTCGGCGACGAAAACAAGGCGGTCGAGGTCAATT
ACGAGAAGATGAAGGACAAGCTCCTGGGTGAGGTCAAGAAGAGCTTCCGGCCAGAGTTCCTGAACCGGGTGGATTCGACG
GTAGTCTTCCATTCGCTGACCCGCGACCAGATACGGGAGATAGTCGACCTGCAGTTGGTGTCCATCACCACCCAGCTCAA
GGAGAAGAATATCGGCATCGAGGTTACCGAATCGGCCAAGGATGTCCTGGGCCGCAAGGGTTACGACGAGGTTTACGGCG
CCCGGCCGCTGAGGCGGGTCATCCAGAACCTGCTGGAAGACCGGCTGTCCGAAGACCTGCTTCGCGGTGATTACGGCCCC
GGCGATACCGTGGTAGTCGACGCTTCCGGTGAAGGAGAAGAACTTACCTTCACCATCCGCCACGCGCCGCCCCAGGAACT
GAAAGTGGCCGAGGAACACCCGGCCCTGGTCGGCGGCGAAGACGGCGAATAA

Protein sequence :
MASRFDKFSERARRVLTYAQEEAQNLNHNYIGTEHILLGMVREEDGVAARVLASMDVNLAKLRSAVEFVIGRGEKPSSGE
TGLTSRAKKVIELAIDEARTLNHNYIGTEHLLLGLLREGEGVAAGVLDSFGITIDKTRAEITRVLSQGAINRGAPLKAGG
RSQSKTPNLDAVSLDLTAAARAGKLDPVVGRQKEIDRVIQILSRRTKNNPALIGEPGVGKTAIVEGLAHRIVAADVPETL
ENKRLVSLDIASLVAGTKYRGEFEERLKKILEELRASGNIVVFIDEFHTMVGAGAAEGAVDAANIMKPSLARGEIQIIGA
TTLDDYRKHVERDAALERRFQPVLVEEPSLEDTIEILRGIRSRYEEHHRLEITDDALEAAASMASRYISDRFMPDKAIDI
IDEASSRVRIRHRTKPMPLKDLKKAEDSYRRDKEAALATQQYDFAAELREREYQIAEKRRKMEEEWQEEQGQALPKVSKE
DIADVVSMWTGVPLLQLTGDETERLLHMEEVLHERIIGQEEAINTIAKAVRRARAGLKDPSRPIGNFIFLGPTGVGKTEL
ARALAQFMFGSEDSMVRIDMSEFMEKFAVSRLVGAPPGYVGYDEGGQLTEAVRRKGYCLILLDEIEKAHADVFNILLQIF
DDGHLTDAKGRRVDFRNSIVIMTSNIGADLIRKGSGTIGFSTVGDENKAVEVNYEKMKDKLLGEVKKSFRPEFLNRVDST
VVFHSLTRDQIREIVDLQLVSITTQLKEKNIGIEVTESAKDVLGRKGYDEVYGARPLRRVIQNLLEDRLSEDLLRGDYGP
GDTVVVDASGEGEELTFTIRHAPPQELKVAEEHPALVGGEDGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dehly_1200 YP_003758813.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 57
Dehly_1200 YP_003758813.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 3e-133 49