Gene Information

Name : Hden_3450 (Hden_3450)
Accession : YP_003757562.1
Strain : Hyphomicrobium denitrificans ATCC 51888
Genome accession: NC_014313
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3522897 - 3523829 bp
Length : 933 bp
Strand : -
Note : KEGG: pde:Pden_3630 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase

DNA sequence :
TTGCAAGCTGCCCGCATTCGTATCGGGACCCGTGGCTCGCCGTTGGCGCTGGCTCAGGCCCATGAAGTCCGCGATCGGCT
CGCCAAGGCTCACGGACTGTCCGAGGACGCCATATCCATCACGATCATCAAGACGACCGGCGATCGCGTGACCGACCGCC
CGCTCTCCGACATCGGCGGAAAAGGCCTGTTCACCAAGGAGATTGAAGACGCGCTCTTCGCCCGCGAGATCGACATCGCC
GTGCATTCCATGAAGGACATGCAGACGGAATTGCCGGACGGGCTCGCCCTCGGCGCGGTCCTGCCGCGCGAAGACCCGCG
CGATGCCTTCATCTCCCTGAAGCACGCCAATATCTCTGCGCTGCCCACAGGAGCGATCGTCGGAACCTCGTCGCTCCGGC
GCAAATCGCAAGTGCTGAGCATCCGCCCCGATCTCAGCGTCATCGATTTTCGCGGCAACGTCGAAACGCGCTTGCGCAAG
CTCAAGGACGGCATTGCCGAGGCGACGTTCCTCGCCGTCGCCGGATTGAACCGCCTTGGACTTTCCGACCGGATCACCGC
GATTGTTCCGTCCGCCGACATGCTGCCCGCCGCCGCGCAGGGAGCGATCGGGCTTGAAATTCGCACCGGCGACAAGGAGG
CCGAGGCTTTCGTTGCACCGCTGAATGACGTGAACTCGCAACGCGCTGTAACCGCGGAGCGCGCGTTTCTCGCGCGCCTT
GAAGGCTCGTGCCGGACGCCGATCGCGGCTCATGCGACGATCGACGGCGAGCAGCTGTCGTTTCGCGGGCAGGTTCTTTC
CCTCGACGGTCAGCAGAAATATGACGTCTCGCGCTCAGGCGCAGCGAACGCAAGCCGCGACATCGGCCTCGCTGCAGCCG
ACGAAGTCCTGAGCAAAGCCGATCCCGCCCTTCTTGTTCGCTCGAGCGCCTGA

Protein sequence :
MQAARIRIGTRGSPLALAQAHEVRDRLAKAHGLSEDAISITIIKTTGDRVTDRPLSDIGGKGLFTKEIEDALFAREIDIA
VHSMKDMQTELPDGLALGAVLPREDPRDAFISLKHANISALPTGAIVGTSSLRRKSQVLSIRPDLSVIDFRGNVETRLRK
LKDGIAEATFLAVAGLNRLGLSDRITAIVPSADMLPAAAQGAIGLEIRTGDKEAEAFVAPLNDVNSQRAVTAERAFLARL
EGSCRTPIAAHATIDGEQLSFRGQVLSLDGQQKYDVSRSGAANASRDIGLAAADEVLSKADPALLVRSSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-57 47
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-57 47