Gene Information

Name : Hden_3294 (Hden_3294)
Accession : YP_003757408.1
Strain : Hyphomicrobium denitrificans ATCC 51888
Genome accession: NC_014313
Putative virulence/resistance : Unknown
Product : alanine racemase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 3369128 - 3369808 bp
Length : 681 bp
Strand : +
Note : PFAM: alanine racemase domain protein; KEGG: avi:Avi_4380 hypothetical protein

DNA sequence :
GTGACAGACGACACCTACCACGATACCGCGCCGGATAGGTTAAAGCGCGTAAGGCATGAGATCGTCGCGGCCGCAGAGGC
GGTCAAGCGCTCGCCAGCAGATATCGAACTGATTGCAGTTTCAAAGACTTTCGACGCCGACGCCGTGCGTCCGGTGCTGG
CTGCGGGGCAACGCGTGTTCGGCGAAAATCGCGTGCAGGAAGCCGAGCGCAAGTGGCCGGAGCTGAAGCGCGAGTTCGCG
GATGTCGAATTGCATCTGATCGGGCCGTTGCAATCGAACAAGGCCAAGGACGCGGTCGCGCTGTTCGACGTCATTCATAC
GATCGATCGCGAGAAGATCGCGCGCGCGGTTGCGGAAGAAATTTCGCGGCAGGGGCGGGCGCTCAAACTTTTCGTGCAGG
TCAACACGGGCGAAGAGCCGCAAAAGGCCGGCGTGCCGCCGAGCGAGGCGAAAGCGTTCGTCGATTTTTGCAGATCGGAT
CTCAAGCTGCCGATCGTCGGGCTGATGTGCATTCCGCCGGTGGACGAAGAGCCGGCGGTGCATTTCGCGTTTCTCGCGAA
GCTCGCGAAAGAAGGCGGTCTCAAAAGCCTCAGCATGGGCATGAGTAGCGATTTCGAGACGGCGATTGCCTTCGGGGCCA
CGCACGTTCGCGTCGGGAGCGCGATATTCGGGGGACGGTAA

Protein sequence :
MTDDTYHDTAPDRLKRVRHEIVAAAEAVKRSPADIELIAVSKTFDADAVRPVLAAGQRVFGENRVQEAERKWPELKREFA
DVELHLIGPLQSNKAKDAVALFDVIHTIDREKIARAVAEEISRQGRALKLFVQVNTGEEPQKAGVPPSEAKAFVDFCRSD
LKLPIVGLMCIPPVDEEPAVHFAFLAKLAKEGGLKSLSMGMSSDFETAIAFGATHVRVGSAIFGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-17 41
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-17 41
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-17 41
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-17 41