Gene Information

Name : Hden_3259 (Hden_3259)
Accession : YP_003757373.1
Strain : Hyphomicrobium denitrificans ATCC 51888
Genome accession: NC_014313
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3334912 - 3335667 bp
Length : 756 bp
Strand : -
Note : KEGG: azl:AZL_000320 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence :
ATGACAAAATCCAGCGTGCGCATTGAGCAAGGCGGCCAGAATTTGAGCGATTCCATTATTCAACTCGACAATGTGCATCT
GACGCTGACGAGCAAAGCCGGCCCGGTGCACATCCTGCGCGGCGTCTCGCTCGATATTCCGGCCGGGCAGCCGGCGGCGA
TCGTCGGTCCTTCGGGCTCCGGAAAAACCTCGCTCCTGATGGTGATGGCGGGCCTCGAACGCGCGAGCAGCGGGTCGGTC
GCGATTGCAGGGCGTGAGCTGACGCGATTGTCGGAGGACGATCTCGCCGTGCTTCGCGGCGCCGAGATGGGCATCATCTT
CCAATCGTTCCATCTCGTCCCGACGATGACCGCGCTCGAGAACGTCGCCTTGCCGATGGAGCTGGCGGGCGAAGCGGACG
CCTATAAGAACGCGCGCGAGCTTTTGAAGGAAGTCGGCCTCGCGGCGCGCGTGGAACACTATCCCGCCGAGCTGTCAGGC
GGCGAACAACAGCGTGTCGCCATTGCGCGCGCCCTCGTTCGCGAACCGCGCATCATCTTCGCCGACGAGCCGACAGGCAA
TCTCGATGGCGGCACCGGCCGCCAGATCGTCGATCTTCTGTTTGGTCTGCGCCGCCGTCGTAACGCAACGCTGGTGATCG
TCACGCACGATGATCGCCTGGCGCACATGGCCGACCGCATCATCCGCATGTCCGACGGGTCCGTTGCGTCTGATGAATCG
ACGAGGTCCTCGGCCGTTCGCGCGGTGTCGCCGTGA

Protein sequence :
MTKSSVRIEQGGQNLSDSIIQLDNVHLTLTSKAGPVHILRGVSLDIPAGQPAAIVGPSGSGKTSLLMVMAGLERASSGSV
AIAGRELTRLSEDDLAVLRGAEMGIIFQSFHLVPTMTALENVALPMELAGEADAYKNARELLKEVGLAARVEHYPAELSG
GEQQRVAIARALVREPRIIFADEPTGNLDGGTGRQIVDLLFGLRRRRNATLVIVTHDDRLAHMADRIIRMSDGSVASDES
TRSSAVRAVSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hden_3259 YP_003757373.1 ABC transporter NC_008702.1.4606598. Protein 1e-36 48
Hden_3259 YP_003757373.1 ABC transporter CP001581.1.gene598.p Protein 7e-40 44
Hden_3259 YP_003757373.1 ABC transporter NC_012469.1.7686878. Protein 3e-37 42
Hden_3259 YP_003757373.1 ABC transporter NC_012469.1.7685735. Protein 5e-38 42