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Name : Hden_3112 (Hden_3112) Accession : YP_003757228.1 Strain : Hyphomicrobium denitrificans ATCC 51888 Genome accession: NC_014313 Putative virulence/resistance : Virulence Product : ATPase, FliI/YscN family Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 3172714 - 3174084 bp Length : 1371 bp Strand : + Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; KEGG: msl:Msil_1657 flagellum-specific ATP synthase; SMART: ATPase AAA DNA sequence : GTGACAGCAGCAGCTTCGGCGTCCGCGTTCGACCGGCTCGACGCCATGCTGGCGCTTGCGGCGGCGCGACGGCCGGCGCA TCGGATTTCGGGACGGGTCGCGCGCATCAGCCCCACGTATATCGTCGTGACCGGGCTGTCGAAATTCGTCTCCATCGGCG ACGCTGTCTCGATCGCAGGCATTGGCGGATCGGTACTGGCCGAGGTTGCGAGCATCGAAGCGCAGGTCATCAACGTCACC CCGTTCATCGCCGATCACAGGATCGAGCTCGGCGCGTCCGTCACGGCACTGTCGGGCCAGCTGACGTTGTCGCCACACGA GTCGTGGCTCGGGCGGACGCTGAACGCGCTTGGGCATCCCATCGATGATCAGGGGCCGCTCATCGCGGGCGATCGCGCCG TTCCGATTCAGGGCAGCCCGCCGGCCGCGATGCGCCGGAGCCGCCTCGGCGAACAGTTGAAAACTGGCGTCAAGGCGATC GACCTCTTCACGCCGATTTGCGCGGGCCAGCGCATCGGCATCTTCGCCGGTTCCGGCGTCGGCAAATCGACGTTGCTTGC CATGCTCAGCCGCGCCCCTTCGAGCGACGTGACCGTTCTCGCGCTCGTCGGCGAACGTAGTCGCGAGGTTCGCGATTTTC TCGACGATACGCTCAGCGCCTCGCGCGATCGCGTCGTGTCCGTCGTCGCGACCTCGGACGAAAGCCCGATGATGCGCCGC CTGGCGCCCGCCGCCGCCATGTGCATCGCGGAGTACTATCGCGATCAGGGCAAGAACGTGCTGTTGATCATCGACTCACT GACGCGCTACGCGCACGCCATGCGCGAATTGGCGCTCGCGTCCGATGAACCGCCCGTCGCACGCGGCTATCCGCCGAGCG TTTTCAGTGCGCTGCCCCGACTATTGGAGCGCGCCGGAACCGGCGAAGAGGGCGCGGGCACGATCACGGCCGTTCTTTCG GTTCTCGTCGACGGCGACGACCACAATGATCCGATCGCGGACGCGGCGCGCGGAATTCTCGATGGGCACATCGTGCTGGA GCGGAGCATTGCGAGCCAGGGCCGATTGCCGGCCGTCGATCCGCTGGCGTCGCTGTCGCGGCTCGCGCCGAAAATCCGAA CGAAACAGCAATCGCAGTTCACGACACAGCTGATCGAGAGCATTTCCCGTTTCGAAGATACGCGCGATCTCCGCGCTATC GGCGGGTATCGGCCCGGCAGCGACCTGACGCTCGACCGGGCGCTCGAAACCGTGCCGCGCGTCTACGATGCGTTGAAGCA GGATCTCAACGAAACCCCCGTCGAGGATGTTTTTGCGTTTCTCGCTCAAACCCTGTCGAACCCGCGCGCGAATGCTCCGC CATCTCGGTAA Protein sequence : MTAAASASAFDRLDAMLALAAARRPAHRISGRVARISPTYIVVTGLSKFVSIGDAVSIAGIGGSVLAEVASIEAQVINVT PFIADHRIELGASVTALSGQLTLSPHESWLGRTLNALGHPIDDQGPLIAGDRAVPIQGSPPAAMRRSRLGEQLKTGVKAI DLFTPICAGQRIGIFAGSGVGKSTLLAMLSRAPSSDVTVLALVGERSREVRDFLDDTLSASRDRVVSVVATSDESPMMRR LAPAAAMCIAEYYRDQGKNVLLIIDSLTRYAHAMRELALASDEPPVARGYPPSVFSALPRLLERAGTGEEGAGTITAVLS VLVDGDDHNDPIADAARGILDGHIVLERSIASQGRLPAVDPLASLSRLAPKIRTKQQSQFTTQLIESISRFEDTRDLRAI GGYRPGSDLTLDRALETVPRVYDALKQDLNETPVEDVFAFLAQTLSNPRANAPPSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-54 | 43 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-54 | 43 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 3e-54 | 43 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 9e-54 | 43 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 9e-54 | 43 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 2e-56 | 42 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 8e-44 | 41 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 8e-44 | 41 |
| ysaN | AAS66842.1 | YsaN | Not tested | SSR-1 | Protein | 3e-41 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hden_3112 | YP_003757228.1 | ATPase, FliI/YscN family | VFG1254 | Protein | 3e-57 | 46 |
| Hden_3112 | YP_003757228.1 | ATPase, FliI/YscN family | VFG2144 | Protein | 2e-56 | 45 |
| Hden_3112 | YP_003757228.1 | ATPase, FliI/YscN family | VFG2331 | Protein | 3e-50 | 44 |
| Hden_3112 | YP_003757228.1 | ATPase, FliI/YscN family | VFG0515 | Protein | 2e-54 | 43 |
| Hden_3112 | YP_003757228.1 | ATPase, FliI/YscN family | VFG0192 | Protein | 4e-55 | 42 |
