Gene Information

Name : Hden_2935 (Hden_2935)
Accession : YP_003757051.1
Strain : Hyphomicrobium denitrificans ATCC 51888
Genome accession: NC_014313
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3031838 - 3032530 bp
Length : 693 bp
Strand : +
Note : KEGG: smd:Smed_5362 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein

DNA sequence : 
ATGACCGGCTCGCGCATTCTCGTCGTTGACGACGAACCGCAAATCCTGCGCTTCCTGAAGCCGAGCCTGACAGCTGCGGG
TTACGAGGTCGTCGTGGCGACGACCGGCAAGGAGGCATTGAAGGCTGCCGCCACGCAATCGCCAGACATCATTCTGCTCG
ATCTCGGTCTCCCCGACATGGACGGCAAGGACGTGATCCGCGAACTCCGAGGATGGTCGAAGACGCCGATTCTGGTGCTT
TCGGCGCGCGACCGGGAGAGCGAAAAGATCGCCGCATTTGATCTCGGCGCCGACGATTACGTCAACAAGCCGTTCGGCAT
CGGCGAACTCACGGCGCGCTTGCGGACGGCGCTCCGCCACGCCGCACAACAAGCTTCCGAACAAACCCATCTGAAATCGG
GAGCCCTCGAGGTCGATGTTCTGGCGCATACGGTGACGCTCAACGGCGCGGCGGTAAAGCTGACGCCGAAGGAGTTCGAT
CTGCTCGCGATCCTGGTTCGCAACGCCGGACGCCTTCTGACGCACCGCCAGCTTCTCGCGGCCGTCTGGGGCGCCGCACA
CACCGAGGACCTGCAATATCTGCGCGTTTTCGTCGGTCAGCTACGGCAAAAGCTCAAAGCATCGCCCGATGCACCAGAAT
TCATCGTGACCGAACCAGGGATCGGCTACCGCCTGCAAATCGACGTAAGTTGA

Protein sequence : 
MTGSRILVVDDEPQILRFLKPSLTAAGYEVVVATTGKEALKAAATQSPDIILLDLGLPDMDGKDVIRELRGWSKTPILVL
SARDRESEKIAAFDLGADDYVNKPFGIGELTARLRTALRHAAQQASEQTHLKSGALEVDVLAHTVTLNGAAVKLTPKEFD
LLAILVRNAGRLLTHRQLLAAVWGAAHTEDLQYLRVFVGQLRQKLKASPDAPEFIVTEPGIGYRLQIDVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-27 43
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 9e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hden_2935 YP_003757051.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hden_2935 YP_003757051.1 winged helix family two component transcriptional regulator VFG1390 Protein 7e-23 41