Gene Information

Name : Hden_2821 (Hden_2821)
Accession : YP_003756938.1
Strain : Hyphomicrobium denitrificans ATCC 51888
Genome accession: NC_014313
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2905624 - 2906313 bp
Length : 690 bp
Strand : -
Note : KEGG: sal:Sala_0801 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein

DNA sequence : 
ATGCTGCTAGAAAGCGTGGACACGCGGGAGACGCCCATTCGCATACTGCTGATAGAAGATGACGATGAAATCGCCGATCG
ACTTGTAGCCGGTCTTGCGCGAGCAGGATTTACTGTCGAACGCGCGGACAACGGGGCTGATGGTTATGCCATGGGATTGG
ACGACACGTACGCCGCGGCAATCCTCGACCTCGGACTTCCGCAGATGCAGGGGCTTGACGTTCTCAAGCGCTGGCGCGCG
TCCGATCGCAAGCTCCCCGTTTTGATTCTCAGCGCGCGTGGAACATGGGCGGAGAAAGTCGACGGTCTTAACGCAGGCGC
GGACGACTACATCACCAAGCCGTTCCACATCCCCGAAGTTGCGGCAAGGCTTAAAGCGCTGATCCGGCGCGCCTCGGGAA
TTGCGAGTCCGGTGCTCAGCCATGGTGGCATCTCGCTCGATACGACATCGAACCGTGTCTGCCAAAACGGCGAGAGCATC
GAATTGACCGCGCGTGAACTCAAGATGCTGACCTACTTCATGCATCGCATTGGCCGCATCGTTTCGCAGGCCGAGCTGGT
CGATCATCTCTACGCGCTCGAGGACAGCCGGGAGTCAAATACCATCGAAGTTTACATCAGCCGCTTGCGGCGGAAGCTCG
GCGCTGACGTCATTACCACTGTTCGCGGACTCGGATACCGGATGGACTGA

Protein sequence : 
MLLESVDTRETPIRILLIEDDDEIADRLVAGLARAGFTVERADNGADGYAMGLDDTYAAAILDLGLPQMQGLDVLKRWRA
SDRKLPVLILSARGTWAEKVDGLNAGADDYITKPFHIPEVAARLKALIRRASGIASPVLSHGGISLDTTSNRVCQNGESI
ELTARELKMLTYFMHRIGRIVSQAELVDHLYALEDSRESNTIEVYISRLRRKLGADVITTVRGLGYRMD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hden_2821 YP_003756938.1 winged helix family two component transcriptional regulator CP000647.1.gene1136. Protein 8e-37 46
Hden_2821 YP_003756938.1 winged helix family two component transcriptional regulator CP001918.1.gene2526. Protein 2e-36 46
Hden_2821 YP_003756938.1 winged helix family two component transcriptional regulator BAC0530 Protein 7e-37 46
Hden_2821 YP_003756938.1 winged helix family two component transcriptional regulator CP001138.1.gene1939. Protein 2e-36 45
Hden_2821 YP_003756938.1 winged helix family two component transcriptional regulator NC_002695.1.913289.p Protein 1e-35 45
Hden_2821 YP_003756938.1 winged helix family two component transcriptional regulator CP000034.1.gene2022. Protein 1e-36 45
Hden_2821 YP_003756938.1 winged helix family two component transcriptional regulator CP004022.1.gene1005. Protein 4e-37 44
Hden_2821 YP_003756938.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 6e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hden_2821 YP_003756938.1 winged helix family two component transcriptional regulator VFG0475 Protein 1e-36 45