|
Name : Hden_2518 (Hden_2518) Accession : YP_003756635.1 Strain : Hyphomicrobium denitrificans ATCC 51888 Genome accession: NC_014313 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 2571897 - 2573372 bp Length : 1476 bp Strand : - Note : KEGG: rce:RC1_3548 catalase; PFAM: catalase related subgroup; catalase domain protein DNA sequence : ATGACAGACACGACCAAGCTCACGACGTCCGCTGGCGCGCCCGTCGCCGATAATCAGAACTCTCTGTCCGCCGGCGCACG CGGCCCGTTGCTGCTTCAGGATTATCAGCTGCTCGAAAAGCTCGCGCACCAGAACCGCGAGCGCATTCCTGAGCGCGTTG TTCACGCCAAAGGCTGGGGTGCATTCGGCTCGCTCACCGTAACGCAGGATATCTCGAAGTATACGCACGCCAAGCTGTTC GATGCGATCGGCAAGAAGACCGACCTTCTAATCCGTTTCTCGACCGTTGCCGGTGAACTCGGCGCCGCCGACGCGGAACG CGACGTGCGCGGCTTCTCGATCAAGTTTTACACCTCCGAAGGCAACTGGGATCTCGTCGGCAACAACACGCCGGTCTTCT TCGTGCGTGACGCGCTGAAGTTCCCGGACTTCATCCACACGCAGAAACGCCATCCGAAAACCAACCTTCGCTCGCCGACC GCGATGTGGGACTTCTGGTCATTGTCGCCGGAAAGCCTTCACCAGGTGACGATCCTGTTTTCCGATCGCGGCTGCCCGAC CAGCGTGCGCCATATGAACGGCTATGGCTCGCACACGTACTCGTTCCTGAACGCTGCCGGCGAGCGCCACTGGGTGAAGT TCCACTTCAAGACCCTGCAAGGCCATCAGCATCATACGAATGCCGAAGCCGCGGAGCTCATCGGCAAAACGCGTGAGAGC TACCAGGAAGACCTGTTCGGCTCGATCGAAAAGGGAGATTTCCCGAAGTGGCGCATGTTCGTTCAGATCATGCCGGAAGC GGACGCTGACAAAACGTCCTACAATCCGTTTGACCTGACGAAAGTCTGGCCGCACGCCGATTATCCTTTGATCGAAGTCG GCATCGTCGAACTGAACCGCAACGCGGACAACTATTTCGCTGAGATCGAGCAGGCCGCGTTCTCGCCGTCGAACATCATT CCCGGCATCGGCTTTTCGCCGGACAAGATGCTTCAGGCGCGCATTTTCTCGTACGCGGACGCGCACCGTCATCGCCTCGG TACGCATTACGAGGCATTGCCCGTCAACGCTCCGAAATGCCCCGTGCATCACTATCATAAGGACGGCGCGATGCGGTTCT TCCGCAACGACACCGGCAATCCCGACGCCTATTATGAGCCGAATTCGTTCGGCGGACCGAAGGAAACGCCCACGTACAGG GAGCCGCCGCTCAAGATCTCGGGCGATGCCGACCGCTACAATCATCGTCTCGGCAACGACGACTACACGCAGCCGGGCAA CCTGTTCCGCCTGTTGACGCCCGATGGCCGCGAACGCCTGATGGATAACATCGCAGCCGCAATGCAGGGCGTTCCGGCGT TCATCATCGAGCGCCAGGTCGCGCACTTCGCGAAATGCGATCCGGCGTACGGTGCGGGCGTCGCGAAGCGAATGGGCGTG TCAGTGCCGTCGGCGCGAGCCGAAGCGGCGGAGTAA Protein sequence : MTDTTKLTTSAGAPVADNQNSLSAGARGPLLLQDYQLLEKLAHQNRERIPERVVHAKGWGAFGSLTVTQDISKYTHAKLF DAIGKKTDLLIRFSTVAGELGAADAERDVRGFSIKFYTSEGNWDLVGNNTPVFFVRDALKFPDFIHTQKRHPKTNLRSPT AMWDFWSLSPESLHQVTILFSDRGCPTSVRHMNGYGSHTYSFLNAAGERHWVKFHFKTLQGHQHHTNAEAAELIGKTRES YQEDLFGSIEKGDFPKWRMFVQIMPEADADKTSYNPFDLTKVWPHADYPLIEVGIVELNRNADNYFAEIEQAAFSPSNII PGIGFSPDKMLQARIFSYADAHRHRLGTHYEALPVNAPKCPVHHYHKDGAMRFFRNDTGNPDAYYEPNSFGGPKETPTYR EPPLKISGDADRYNHRLGNDDYTQPGNLFRLLTPDGRERLMDNIAAAMQGVPAFIIERQVAHFAKCDPAYGAGVAKRMGV SVPSARAEAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-136 | 62 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 5e-99 | 50 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-96 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-96 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-96 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-96 | 47 |
