Gene Information

Name : Hden_2486 (Hden_2486)
Accession : YP_003756603.1
Strain : Hyphomicrobium denitrificans ATCC 51888
Genome accession: NC_014313
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2544589 - 2545287 bp
Length : 699 bp
Strand : -
Note : KEGG: mlo:mll2816 two-component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein

DNA sequence :
ATGAGGGTTCTACTCATAGAAGACGACAGCGCTACGGCGCAAAGCATCGAGCTGATGCTTCAATCTGAAGGTTTTAACGT
TTACACGACCGACCTCGGCGAAGAGGGTGTCGATCTCGGTAAGCTTTACGACTACGATATTATTCTTCTCGATTTGAATT
TGCCGGACATGAGCGGCTATGAGGTTCTGAAGACACTCCGTGTCTCGAAAGTCTCAACGCCGATCCTGATCCTGTCGGGC
CTCGCCGGCATCGACGACAAGGTTCGCGGCCTCGGCTTCGGCGCCGATGACTATATGACGAAGCCGTTCCACAAGGACGA
GCTCGTCGCCCGCATCCAGGCGATTGTCCGCCGTTCGAAGGGCCATGCCCAGTCGATCATCGAAACGGGCGATCTGCGCG
TCAACCTCGACACCAAGACGGTCGACGTCAACGGCCAGCGCGTGCATCTGACGGGCAAGGAATACCAGATGCTGGAGCTT
CTCTCGCTCCGCAAGGGTACCACGCTCACGAAGGAGATGTTCCTCAACCATCTCTACGGCGGCATGGACGAGCCTGAACT
GAAGATCATCGACGTGTTCATCTGCAAGCTGCGCAAGAAACTGCAGACGGCAACCGGCGGCAAGCACTACATCGAGACGG
TCTGGGGCCGTGGCTACGTGCTGCGCGATCCGGGACACGAAGGTTCGGAAGCCGCATAA

Protein sequence :
MRVLLIEDDSATAQSIELMLQSEGFNVYTTDLGEEGVDLGKLYDYDIILLDLNLPDMSGYEVLKTLRVSKVSTPILILSG
LAGIDDKVRGLGFGADDYMTKPFHKDELVARIQAIVRRSKGHAQSIIETGDLRVNLDTKTVDVNGQRVHLTGKEYQMLEL
LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLQTATGGKHYIETVWGRGYVLRDPGHEGSEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 1e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hden_2486 YP_003756603.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 3e-27 42
Hden_2486 YP_003756603.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 1e-24 41
Hden_2486 YP_003756603.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 1e-24 41
Hden_2486 YP_003756603.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 1e-24 41
Hden_2486 YP_003756603.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 1e-24 41
Hden_2486 YP_003756603.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 1e-24 41
Hden_2486 YP_003756603.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 1e-24 41
Hden_2486 YP_003756603.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 1e-24 41
Hden_2486 YP_003756603.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 1e-24 41