Gene Information

Name : Hden_2221 (Hden_2221)
Accession : YP_003756340.1
Strain : Hyphomicrobium denitrificans ATCC 51888
Genome accession: NC_014313
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 2274860 - 2276269 bp
Length : 1410 bp
Strand : +
Note : KEGG: avi:Avi_2375 glutamine synthetase; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase; glutamine synthetase beta-Grasp

DNA sequence :
ATGAAGAACGCAAGTGACGTCCTGAAATTCATCAAGGACAAGGAAGCCAAGTTCGTGGATTTCAGATTCACGGACACCAA
AGGCAAGATGCAGCACGTGACGGCCGACGTCAGCTGCGTCGACGACAGCGTGTTCAGCGACGGCTACGCCTTCGACGGTT
CGTCGATCGCGGGCTGGAAGACGATCGAAGCGTCCGACATGACGCTGATGCCGGACCCGACGTCGGCGCACATCGATCCC
TTCTTCGCGCAGACGACGGTCGTTCTGTTCTGCGACGTTCTCGAGCCGTCGACGGGTCAGCCCTACGAACGCGACCCGCG
CTCGATCGCCAAGAAGGCCGAAGCCTACATGATGTCGCTCGGCCTCGGCGACAAAGTCTATTTCGGCCCGGAAGCCGAAT
TCTTCATCTTCGACGACGTCAAGTTCTCGACGGACATGTACTCGGTCGGCTTCAAGGTCGACTCGAGCGAGCTGCCGACC
AACTCGTCGGCCGACATCGAGATGGGCAACCTCGGACACCGTCCGCGCGTCAAGGGCGGCTACTTCCCGGTTCCGCCGAT
CGACAGCTGCCAGGACATCCGTTCGGAAATGCTGTCGGTGCTGTCGGAGATGGGCGTCTCGGTCGAGAAGCATCACCACG
AGGTCGCCGCCGCCCAGCATGAGCTCGGAGTCAAGTTCGGCCCGATGATCATGATGGCCGACCATATGCAGATCTATAAG
TACGTCGTGCACAGCGTCGCGCAGGCCTACGGCAAGACGGCGACGTTCATGCCGAAGCCGATCTTCGGCGACAACGGCTC
GGGCATGCACGTCCACCAGTCGATATGGAAGGGCGGACAGCCGATGTTCGCGGGCGACAAGTACGCCGACCTTTCGCAGA
TGTGCCTCTACTACATCGGCGGTATCCTGAAGCACGCGAAGGCGATCAACGCGTTCTCGAACCCGCTGACGAACTCCTAC
AAGCGTCTCGTCCCGGGTTACGAAGCGCCGGTTCTGCTCGCCTACTCGGCGCGCAACCGTTCGGCGTCGTGCCGCATTCC
GCACGTTTCGAACCCCAAGGCGAAGCGCGTCGAAGTCCGTTTCCCCGATCCGGGCGCGAACCCGTATCTCGCGTTCACGG
CGATGTTGATGGCGGGCCTTGACGGCATCCAGAACAAGATCGATCCCGGTCCTGCGATGGACAAGAATCTTTACGACCTA
CCGCCGGCAGAGCTTGCGAAGATTCCGACCGTTGCGGCCTCCTTGCGCGAAGCTCTCGACAGCCTCGACAAGGATCGCGA
CTTCCTCAAAGCGGGCGGCGTCATGAACGACGACATGATCGACGCCTACATCGCGCTGCGCATGGAAGAGAACATGCGCT
ACGAGATGACGCCGCATCCGGTCGAGTACGACATGTACTATTCGGTCTGA

Protein sequence :
MKNASDVLKFIKDKEAKFVDFRFTDTKGKMQHVTADVSCVDDSVFSDGYAFDGSSIAGWKTIEASDMTLMPDPTSAHIDP
FFAQTTVVLFCDVLEPSTGQPYERDPRSIAKKAEAYMMSLGLGDKVYFGPEAEFFIFDDVKFSTDMYSVGFKVDSSELPT
NSSADIEMGNLGHRPRVKGGYFPVPPIDSCQDIRSEMLSVLSEMGVSVEKHHHEVAAAQHELGVKFGPMIMMADHMQIYK
YVVHSVAQAYGKTATFMPKPIFGDNGSGMHVHQSIWKGGQPMFAGDKYADLSQMCLYYIGGILKHAKAINAFSNPLTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPHVSNPKAKRVEVRFPDPGANPYLAFTAMLMAGLDGIQNKIDPGPAMDKNLYDL
PPAELAKIPTVAASLREALDSLDKDRDFLKAGGVMNDDMIDAYIALRMEENMRYEMTPHPVEYDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 8e-104 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hden_2221 YP_003756340.1 glutamine synthetase VFG1399 Protein 4e-105 51