|
Name : Hden_2169 (Hden_2169) Accession : YP_003756289.1 Strain : Hyphomicrobium denitrificans ATCC 51888 Genome accession: NC_014313 Putative virulence/resistance : Unknown Product : S-adenosylmethionine/tRNA-ribosyltransferase- isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 2228434 - 2229546 bp Length : 1113 bp Strand : - Note : KEGG: rec:RHECIAT_CH0002168 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein DNA sequence : ATGCGCACCGACCTTTTCGACTTCGAGTTGCCCGATAGCGCCATCGCACTGCGTCCCGCCGAGCCGCGGGATTCGGCGCG CCTGCTGGTCGTGCATCCAGTAAAGGGCGGTTGCGCGCGCGACGATGCCGAACTTTCCGACAAGACGGTTCGCGATCTGC CGGGCTTGCTCAATCCGGGCGACGCGCTCGTCTTCAACGACACGCGCGTCATTCCGGCGGCGCTCTCGGGCGTGCGTACG CGCGGCGACGTGCAGGCGAAGGTCGATTTCAATCTGACGAAGCAGGTCGGAGACAGTTCCTGGCGCGCCTTCGCGCGTCC TGCGAAACGTCTCGAGGTCGGCGATCGCGTGCATTTCGGCCACTCAGGCGAAAGCTGCTTTCTCGGCGCACTCGATGCGA CCGTTTCGGCGAAAGGAGAGGCGGGGGAAGTCGAGCTGGCGTTCGACTATTCGGGGAGCATTCTCGACGATGCGATCCGC GCGGTCGGCGTGATGCCGTTGCCGCCTTACATCGCGTTGAAGCGTGGCGCCGACGATCGCGACCGCCAGAGCTATCAAAC TGTCTACGCGAAGAATGACGGCGCCGTTGCCGCGCCGACCGCCGGGCTGCACTTCACGCCCGAGCTTTTCGCCGCCCTCG ACGCGCGCGGCATCTCTCGCCATTTCGTGACGCTGCACGTCGGACCGGGCACGTTCCTTCCCGTGAAGGCCGATGACACC AGCGAGCACAAGATGCACAGCGAGTGGGGCGAGATCTCCGCCGAAACCGCCGCCGCGCTCAACGAAACGCGCGCACGGGG TGGACGCATCGTCGCCGTCGGCACGACGTCTCTGCGCGTTCTCGAAAGCGCCGCGGGCGACGACGGAAGCATTCCGGCCT GGTCGGGCGACACGTCGATCTTCATCACGCCAGGTTATCGCTTCAAAGCCATCGACGCGCTGATGACCAACTTCCACCTG CCGCGCTCGACGCTGTTCATGCTCGTCGCGGCCTTCTCCGGCCTCGGCACCATGCGCGCCGCCTACGGCCACGCCATTCA CTCTGGCTATCGCTTTTATTCCTACGGCGACGCCAGCCTGCTATTCCCCGCGGATGCAGAGCCTAGCACCTGA Protein sequence : MRTDLFDFELPDSAIALRPAEPRDSARLLVVHPVKGGCARDDAELSDKTVRDLPGLLNPGDALVFNDTRVIPAALSGVRT RGDVQAKVDFNLTKQVGDSSWRAFARPAKRLEVGDRVHFGHSGESCFLGALDATVSAKGEAGEVELAFDYSGSILDDAIR AVGVMPLPPYIALKRGADDRDRQSYQTVYAKNDGAVAAPTAGLHFTPELFAALDARGISRHFVTLHVGPGTFLPVKADDT SEHKMHSEWGEISAETAAALNETRARGGRIVAVGTTSLRVLESAAGDDGSIPAWSGDTSIFITPGYRFKAIDALMTNFHL PRSTLFMLVAAFSGLGTMRAAYGHAIHSGYRFYSYGDASLLFPADAEPST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 2e-60 | 45 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 2e-60 | 45 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 2e-60 | 45 |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 2e-61 | 45 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 6e-60 | 45 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 2e-62 | 44 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 3e-59 | 44 |
