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Name : Hden_2155 (Hden_2155) Accession : YP_003756275.1 Strain : Hyphomicrobium denitrificans ATCC 51888 Genome accession: NC_014313 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2208753 - 2210417 bp Length : 1665 bp Strand : - Note : KEGG: bja:bll6021 general secretion pathway protein E; PFAM: type II secretion system protein E; general secretory system II protein E domain protein; SMART: ATPase AAA DNA sequence : ATGAGTGGAAGTTTCAAAGAATATCTTTTGAGCGAACGCCTCGTCACGCCGACTGATCTCGATAACGTCGATAAGTTTCG GCTCGAGTCCGGCGCCTCAATTTTTTCCGCCCTGCGCAAGGCATCAGGAATGCAGTCCCAGGCGATCGTGCGCGCCGTCG CGGACTATCACAAAATTGCGCGCGTTGAAGAAGGCGATTGGGGGCGCTTTCAGCCGCCGCAGACTGAAATACCGACCGCG TTTCTGCGCGAGAATAAAATCTATCCATTGGGTGATGTGGAAGACGGAATACTGCTTGCGATGGAGGATCCATCCGACGC GCAAGCCATCAATGCTGTGAGAATTGCGCTTCAGAGGGAAGTCATTCCGCGCGTCGCTTCGGCCGAAGATATTCTGGCAG CGATCGAGCGCATGGCGCGGGAGCGCGGCACGTCCGCGGTCTGGCAGGAAGCCGAAAAGGCTGAGGCCGGCGACGATGTC GAACATCTCCGCGATATGGCACTCGGCGCACCGGTGGTGCGGTTCGTCAACCAGATGATCCAGAACGCCGTGCATGCGCG GGCAACCGACATCCATATCGAACCGTTTGACGGCCACGTCGCAATCCGCATTCGCGTCGATGGTATGCTGCGGGACGTCA CCGCGCCGCCCGCGCAAATGGCGAAGGCAATCGTCTCGCGTGTTAAAATTCTATCCGGTTTGAATATCGCCGAGCGTCGC CTGCCGCAGGATGGACGTGCGCGCATACGTATTAATGAGCATCGGCTCGATCTTCGCATTGCCACGATCCCGACGGTTCA CGGCGAAGCCGTCGCTATCCGCTTGCTCGATAACGTTCGGCGCATGCTCGATTTCGCACCACTCGGATTTTGCGCCATTG ATGAAGCGGAAATCCGCAAGCATTTGTCGGCGCCTTACGGTCTGATGTTGGTCACCGGGCCGACCGGATCGGGAAAAACG ACGACTCTGGCCACGGCGCTGTCGTTGTTGAACGAAGGCCATCGAAAAATCCTGACGATTGAAGACCCGATCGAATATGA GCTTGACGGTATCAACCAAACGCAGGCGAAGCCATCGATTGGATTGAGCTTTGCCGACGCGCTCCGCTCATTCCTTCGTC ATGATCCGGACGTGCTGATGGTTGGCGAAATGCGCGACGGTGAGACGGCGAGCATCGCGATTCACGCGGCTCTAACCGGC CACCTCGTTCTCTCGACCTTGCATACCAATACCGCAGCCGGCGCTATTCCCCGCTTGCTGGATATGGGGATCGACTCATT TTTGCTCGCATCATCGTTGCGCGGCGTGGTCGGGCAGCGGCTCGTCAGAGTCCTTTGTGAGCATTGCAAGCAGCCATCCG ACGAAGTGCTGTCGCTCGGCCGCGCGCATGGCATTGATGCCGTGCCCGAGGGAAGCCGGCATTGGAGAGCGGTGGGATGC GAGCGCTGCTTCGGCACAGGCTACAGCGGGCGTGTCGTGATCTCGGAAGTCTTGAGCGTCGACGATGAAATTCGCGAGCT GATCCAGCCGAACGCTCAGCCCGCGCTGATCGAAGCGGCCGCGCGCCGAAAGGGAATGACCACGATGATCATGGACGGAC TGGCGAAATGCCTGTCCGGAGTGACGACACAAGAAGAAGTTCGACGCGTGGCGCTCGACGTGTGA Protein sequence : MSGSFKEYLLSERLVTPTDLDNVDKFRLESGASIFSALRKASGMQSQAIVRAVADYHKIARVEEGDWGRFQPPQTEIPTA FLRENKIYPLGDVEDGILLAMEDPSDAQAINAVRIALQREVIPRVASAEDILAAIERMARERGTSAVWQEAEKAEAGDDV EHLRDMALGAPVVRFVNQMIQNAVHARATDIHIEPFDGHVAIRIRVDGMLRDVTAPPAQMAKAIVSRVKILSGLNIAERR LPQDGRARIRINEHRLDLRIATIPTVHGEAVAIRLLDNVRRMLDFAPLGFCAIDEAEIRKHLSAPYGLMLVTGPTGSGKT TTLATALSLLNEGHRKILTIEDPIEYELDGINQTQAKPSIGLSFADALRSFLRHDPDVLMVGEMRDGETASIAIHAALTG HLVLSTLHTNTAAGAIPRLLDMGIDSFLLASSLRGVVGQRLVRVLCEHCKQPSDEVLSLGRAHGIDAVPEGSRHWRAVGC ERCFGTGYSGRVVISEVLSVDDEIRELIQPNAQPALIEAAARRKGMTTMIMDGLAKCLSGVTTQEEVRRVALDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-68 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-68 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hden_2155 | YP_003756275.1 | type II secretion system protein E | VFG0182 | Protein | 7e-71 | 47 |
| Hden_2155 | YP_003756275.1 | type II secretion system protein E | VFG2048 | Protein | 3e-68 | 45 |
