Gene Information

Name : Hden_2153 (Hden_2153)
Accession : YP_003756273.1
Strain : Hyphomicrobium denitrificans ATCC 51888
Genome accession: NC_014313
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2206958 - 2207425 bp
Length : 468 bp
Strand : -
Note : KEGG: nhl:Nhal_0441 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G

DNA sequence : 
ATGAAGGTCACGACGTATGAAGTGGGATTTAGCGCTCAGCGTACCGAACGGCGGCGAGATGGCGAACTGGGATTTACGCT
CGTCGAACTCTTGGTGGTGATGGTCATTCTCGTTCTGCTCGCGAGCCTCGTTGCGCCGCGCGTCATCGGATATCTCGGCA
GCTCACGAACAAAGACCGCGAAGGTGCAGATCGAAAGCCTGAGTACGTCGCTCGAACTCTACAAGCTCGATACTGGACAG
TACCCCGATGGCCGCCAGGGCTTGGTGGCGCTCGTCCAGCGCCCTGGAAATATCCCGAGTTGGAATGGGCCTTATCTGAA
GAAGGATCGCGTGCCGCTCGATCCTTGGGGCCAGCCCTATTTTTACGTCTATCCCGGCAAACACGGCGCTTTCGATATTC
TGTCTCTTGGCGCGGACAAAAAGGAAGGCGGTCAGGGTGAGGATCAAGATGTCACCAGCTGGCAGTGA

Protein sequence : 
MKVTTYEVGFSAQRTERRRDGELGFTLVELLVVMVILVLLASLVAPRVIGYLGSSRTKTAKVQIESLSTSLELYKLDTGQ
YPDGRQGLVALVQRPGNIPSWNGPYLKKDRVPLDPWGQPYFYVYPGKHGAFDILSLGADKKEGGQGEDQDVTSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-17 44
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-17 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hden_2153 YP_003756273.1 general secretion pathway protein G VFG0180 Protein 8e-20 47
Hden_2153 YP_003756273.1 general secretion pathway protein G VFG2050 Protein 8e-18 44