|
Name : Hden_1652 (Hden_1652) Accession : YP_003755780.1 Strain : Hyphomicrobium denitrificans ATCC 51888 Genome accession: NC_014313 Putative virulence/resistance : Resistance Product : DEAD/DEAH box helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1683965 - 1686079 bp Length : 2115 bp Strand : - Note : KEGG: mlo:mlr0830 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; nucleic acid binding OB-fold tRNA/helicase-type; helicase; SMART: DEAD-like helicase ; helicase DNA sequence : ATGCGTCCCTCGTTTCTCAACCCGCTGTTCGCGTCGGCGCAGACGATCTCCGGGATCGGCCCGCGGTTCATCCTGCTTTT GAAGAAATGCCTGGCGCTGCCTCCGGGCGTCGCCGAACCGCGCGTCATCGACCTTCTCTGGCATATGCCGACCGGCATCA TCGACCGGCGCGCCGAACCTCAGCTTGCCTCGGCCGTTCCGGGAAGCATCGTCACGCTGCAGCTACGTGTGCTGAAGCAC AAGCCCGCGCCGCGCGGCAACCGGAAGGCGCCGCACAAAGTTACCTGCGAGGACGACACAGGGCGCATCGATCTCGTCTT CTTCCACGCCGAACGAAAGTTCATCGAGAAGCAGCTTCCCGAAGGTGAGATACGGTTCGTATCCGGACGGATCGAGCGTT ACGGCGAAGCCCTGCAGATGGCGCATCCCGATTATATCGTTGCGCCGGAAGCACGTGACGATCTGCCGATGCTCGAGCCG GTCTATCCGCTGACCGCCGGACTGTCGGGCAAGATCATGGTCAAGGCCGCGCGTCAGGCCGTCGATCGCGTGCCCGAACT TCCCGAATGGCAGGAGAGCCGCTGGCTGGAAGCGCGAGGCTGGCCCGCCTTCAAAACCGCGATCAATCGCATTCACCGGC CGCTCGATGCGCCGGATGTTTCGAACGGCGCAGGCCCGTGGCAGCGCCTCGCCTATGACGAGCTTCTCGCCGGGCAACTC GCGTTTGCGCTCGTGCGTCAGAATATGAAAGCCGAGCGCGGACGGCGTCTCGCCGGCAAAGGCGACATCCGGCAGAAAAT TGCAGACGCGCTTCCGTTCAAGTTGACCGGATCGCAACAGACGGCCCTCGCCGAAATCTCGGACGATCTCGCGGCGTCGC ATCGCATGCTGCGCCTGCTGCAAGGCGACGTCGGCTCCGGCAAGACGGTGGTCGCGCTGATGACGATGGCGGTCGCGATC GAAGCCGGTGCGCAGGCCGCTTTGATGGCGCCGACGGAAGTCCTTGCGCGCCAGCATCAGGAAACCATCGCGCCGCTCGC CGAAGCCGCAGGTCTGCGGATCGCCCTGCTGACGGGCCGCGAAAAGGGCAAGGTACGCGATGCGATCCTAGAGCGTCTCG CATCCGGCGAAACCGACATTCTGATCGGCACGCACGCGCTGTTTCAATCCGACGTCGTGTTTAAAGACCTCGCCCTTGCC GTCATCGACGAGCAGCATCGCTTCGGCGTGCATCAGCGTCTCGCGCTTCAGGCAAAAGGCGCGAACAACGATACGAACGT CCTCGTCATGACGGCGACGCCGATCCCGCGCACGCTGCTGATGACGCATTACGGCGATCTCGACGTTTCGAAGCTCACGG AAAAACCCGCAGGACGAAAGCCGATCACGACGAAGGCGCTACCGCTGGAATCGCTCGAACGCCTCGTCGAACGCATTCGC GCGCAACTCGCCGAGGGCGCGCAGGTCTATTGGGTCTGCCCGCTGATCGAAAGCTCCGAGTTGACCGACCTTGCCGCGGC GGAAGAACGTTTCGCGCATCTCCGCCAGATTTTCGGCGAGGGCGTCGGCCTTCTGCATGGCGCGCTTTCGGCCAAGGAAA AAGACGAGACGATGGCCGCCTTCGCGGAAGGCACGATCAAGATCCTCGTCGCGACGACGGTCATCGAAGTCGGCGTCAAC GTGCCGAACGCCAACATCATGGTGATCGAGCACGCCGAGCGCTTCGGCCTCGCGCAATTGCATCAGCTGCGCGGCCGCGT CGGGCGTGGATCACGCGAGTCGTTCTGCATGCTCGTTTACAAAGCGCCACTTGGAGAGACGGCCGGGCAACGTCTCAAAA TGATGGAAGAGACCGAAGACGGCTTCAAGATCGCCGAAAAGGATCTGGAATTGCGCGGCGGCGGCGAAATTCTCGGCGCA CGCCAGTCAGGCGCGCCAGGATTTCGCGTCGCTGAAGTGCCGGGCTACGACACGCTGCTCGCGGCTGCGAGCGACGATGC GGCGCTGATCCTCGGCAGCGACCCCAATCTCACCTCGCCGCGTGGGCAAGCGCTGCGCACGCTGCTCTATGTTTTCGAAT GCGATGAAGCCGTGCGCCTGTTCCGCGCCGCTTAA Protein sequence : MRPSFLNPLFASAQTISGIGPRFILLLKKCLALPPGVAEPRVIDLLWHMPTGIIDRRAEPQLASAVPGSIVTLQLRVLKH KPAPRGNRKAPHKVTCEDDTGRIDLVFFHAERKFIEKQLPEGEIRFVSGRIERYGEALQMAHPDYIVAPEARDDLPMLEP VYPLTAGLSGKIMVKAARQAVDRVPELPEWQESRWLEARGWPAFKTAINRIHRPLDAPDVSNGAGPWQRLAYDELLAGQL AFALVRQNMKAERGRRLAGKGDIRQKIADALPFKLTGSQQTALAEISDDLAASHRMLRLLQGDVGSGKTVVALMTMAVAI EAGAQAALMAPTEVLARQHQETIAPLAEAAGLRIALLTGREKGKVRDAILERLASGETDILIGTHALFQSDVVFKDLALA VIDEQHRFGVHQRLALQAKGANNDTNVLVMTATPIPRTLLMTHYGDLDVSKLTEKPAGRKPITTKALPLESLERLVERIR AQLAEGAQVYWVCPLIESSELTDLAAAEERFAHLRQIFGEGVGLLHGALSAKEKDETMAAFAEGTIKILVATTVIEVGVN VPNANIMVIEHAERFGLAQLHQLRGRVGRGSRESFCMLVYKAPLGETAGQRLKMMEETEDGFKIAEKDLELRGGGEILGA RQSGAPGFRVAEVPGYDTLLAAASDDAALILGSDPNLTSPRGQALRTLLYVFECDEAVRLFRAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 5e-164 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hden_1652 | YP_003755780.1 | DEAD/DEAH box helicase | BAC0356 | Protein | 7e-101 | 46 |
