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Name : Hden_1265 (Hden_1265) Accession : YP_003755398.1 Strain : Hyphomicrobium denitrificans ATCC 51888 Genome accession: NC_014313 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1291121 - 1292509 bp Length : 1389 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: msl:Msil_0586 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : GTGTTCGACATCAAATGGATCAGAGACAACGCCGACGCCTTCGACGCGAGCTTGCAGCGCCGCGGGCTGGCGCCGCAGGC GGCGGCGTTGGTGGCGCTCGATGACAAGCGCCGCGCGACGCTGACGGCGTTGCAGGATGCGCAGTCGCGGCGGAATGCAG CTTCGAAAGAGATCGGCAAGGCCAAGGGTGCGAAGGACGAGGCGACCGCGGCGCGGTTGATGGCCGAGGTCGCGGACCTT AAGGACACGATCGCCAGAGGTGAGGACGACGAGCGCAAGCTCGACGCGGAGATCAAAGCGGCTCTCGAGGTCATTCCGAA TCTGCCGCGTGCGGACGTTCCGGACGGCGCTGACGAAACAGGCAACGTCGAGGTGCGCAGGGTCGGGACGCCCGCGCGGC TCGATTTCACGCCGAAGCAGCATTTCGAGATCGGCGAAGCGCTGGGACTGATGGACTTCGAAGCGGCGCAGAAGATTTCC GGCGCGCGGTTCGTGGTTCTGAAGGGCGCGCTCGCTCGCCTCGAACGCGCGCTCGCGAGTTTCATGCTCGATCTGCACAC GAGCGAATTCGGCTACACGGAAGTCAATCCGCCGATCCTGGTCAGGCGCGAAGCGATGTTTGGAACAGCGCAGCTACCAA AGTTTGAGATTGATCAATTTTGGGCTCTTTCAGGAATACAATTTTTTGATATGGGCGAAATAGAGAAACGCTCAGCCAGC AAGACCGATCCACAAATCGCATTTCAGATTGCAAGAGAAGCAGCTCTCGAAGCAGCGAAGGGATTAATTCCGACTGCCGA GGTGCCTTTGACGAACCTCGTTCGCGAACAGATCATCGACGAAGCGCAGTTGCCGATGCGTGTGACGGCGTGGACGCCAT GCTTCCGTTCTGAAGCGGGTGCTGCGGGCAAGGACACGCGCGGCATGATCCGCCAGCATCAGTTTTCGAAGGTCGAACTC GTCTCGATCACCACGCCTGACGCATCGCTCGATGAACACGAGCGCATGACGTCTTGCGCGGAGGAAGTTCTGAAGCGTCT CGGGCTTCCGTTCCGCACGATCGTGCTCTGCACCGGCGACATGGGATTTGCCTCGCAGAAAACCTACGACATCGAGGTCT GGCTTCCGGGACAGAATGCCTATCGCGAAATTTCGTCATGCTCCGTGTGCGGTGATTTCCAGGCGCGGCGCATGGATGCA CGCTTCCGTCCGAAAGACGGCGGCAAGCCGGTCTATGTGCATACGCTGAACGGATCGGGTCTGGCCGTCGGACGCACGCT GATCGCCGTGCTCGAGAATTATCAACAGGCGGACGGCAGCGTCATAATTCCCGATGCGCTGAGGCCGTACATGGGTGGCC TGACAAAGATAACCGCAGCGAAGACCTGA Protein sequence : MFDIKWIRDNADAFDASLQRRGLAPQAAALVALDDKRRATLTALQDAQSRRNAASKEIGKAKGAKDEATAARLMAEVADL KDTIARGEDDERKLDAEIKAALEVIPNLPRADVPDGADETGNVEVRRVGTPARLDFTPKQHFEIGEALGLMDFEAAQKIS GARFVVLKGALARLERALASFMLDLHTSEFGYTEVNPPILVRREAMFGTAQLPKFEIDQFWALSGIQFFDMGEIEKRSAS KTDPQIAFQIAREAALEAAKGLIPTAEVPLTNLVREQIIDEAQLPMRVTAWTPCFRSEAGAAGKDTRGMIRQHQFSKVEL VSITTPDASLDEHERMTSCAEEVLKRLGLPFRTIVLCTGDMGFASQKTYDIEVWLPGQNAYREISSCSVCGDFQARRMDA RFRPKDGGKPVYVHTLNGSGLAVGRTLIAVLENYQQADGSVIIPDALRPYMGGLTKITAAKT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-93 | 48 |
