Gene Information

Name : kdsB (RPSI07_0932)
Accession : YP_003751591.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 937755 - 938561 bp
Length : 807 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3023327; Product type e : enzyme

DNA sequence : 
ATGTCGCACGCACCGTTCGTTGCCGTCATCCCCGCGCGGCTCGCCTCCACGCGGCTGCCCAACAAGCCGCTGGCCGACAT
CGGCGGCAAGCCGATGGTGGTGCGCGTGGCCGAGCGCGCGCACCAGTCGTCCGCGGCGCGCGTGGTGGTGGCCACCGATG
CCGTCTCCGTGGCCGATGCCTGCATGCAGCACCACATCGAAGCGGTGCTGACCCGTGCCGACCACGCGTCGGGCACGGAC
CGGCTGGCGGAGGTCGCCACCGTGCTGGCGCTGCCCGACGACGCCATCGTCGTCAACGTGCAGGGCGACGAACCGCTGAT
CGCCCCGACGCTGATCGACAACGTGGCCGCGCACCTGCGTGACCACGCCGATTGCGCCATCGCCACCGCCGCCCATCCCA
TCCACGACGCCGCCGACATCTTCAACCCGAACGTGGTCAAGGTCGTGCTGGACGCCGCCGAACGCGCGATGCTGTTCTCG
CGCGCCCCGCTGCCCTGGGCGCGCGATGCCTGGACGCCCGCCGTGCTGGGCAAGCCCGCTGCCGAACGCCCGCTGCCCGC
CATGCCGGTGCTGCGCCATATCGGCATCTATGCGTACCGCGCCGGGTTCCTGCGCCGCTTCCCGCAGCTGGCCGCCGCGC
CGCTGGAGCTGACCGAGCAGCTGGAGCAGTTGCGTGCCATGTGGCACGGCGAACGCATCGCCGTACTGACCACCGACGAT
GCACCGGCCGCCGGCGTCGACACGCCGGAAGACCTCGCCCGCGTGCGCGCGGCATGGAGCGGTTTATTGTCGCAGGACGG
GCCCTAG

Protein sequence : 
MSHAPFVAVIPARLASTRLPNKPLADIGGKPMVVRVAERAHQSSAARVVVATDAVSVADACMQHHIEAVLTRADHASGTD
RLAEVATVLALPDDAIVVNVQGDEPLIAPTLIDNVAAHLRDHADCAIATAAHPIHDAADIFNPNVVKVVLDAAERAMLFS
RAPLPWARDAWTPAVLGKPAAERPLPAMPVLRHIGIYAYRAGFLRRFPQLAAAPLELTEQLEQLRAMWHGERIAVLTTDD
APAAGVDTPEDLARVRAAWSGLLSQDGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-29 42
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-29 42
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-29 41