Gene Information

Name : xerD (RPSI07_0922)
Accession : YP_003751581.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 928086 - 929012 bp
Length : 927 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10635320, 7744017, 9268326; Product type e : enzyme

DNA sequence :
ATGACCAAGGCTGCCCCCGAAGTCCTAGCCCCCGCCCGGCTCAGCGCGGAGACCATCCAGCGCTTCTGCGATGCGCTGTG
GCTCGAAGACGGCCTCGCCCGCAACACGCTCGATGCCTACCGGCGCGACCTGACGCTCTACGCACAATGGCTCGCCGAGC
GCGGCAAGGCGATCGACCAGACCGAAGACGGCGACCTCGCCGACTACTTCGCCGCGCGCCATGCCGAGAGCCGTGCGTCG
TCCGCCAACCGGCGCCGCACGGTGTTCAAGCGCTTCTTCCAATGGGCATTGCGCGAGCACGTGATCAGCGCCGACCCGTC
GCGCCTGCTGTCGACCGCCAAGCAGCCGCCGCGCATTCCCAAGACGCTGTCCGAGGCGCAGGTCGAGGCGCTGATTGCCG
CGCCCGATATCGACACCCCACTCGGCCTGCGCGACCGCGCCATGATCGAGCTGATGTATGCGAGCGGCCTGCGCGTGTCG
GAGATCGTCGCGCTCAAGACCGTCGAAGTGGGCCTGAACGAAGGCGTGGTGCGCGTGGTCAGCGGCAAGGGCGGCAAGGA
CCGGCTGGTGCCGTTCGGCGCCGAGGCCGGCGACTGGCTGCGGCGCTACCTGCGCGACGGCCGCACCGCGCTGCTGGGCG
AGCGCACCGCCGATGCACTGTTCGTCACCGCGCGCGGCGACGGCATGACACGCCAGGCCTTCTGGCACCTGATCAAACGC
TATGCCCTGCGCGCCGACCTCCACGCGCCGCTGTCGCCGCACACGCTGCGGCACGCCTTCGCCACGCACCTGCTCAACCA
CGGCGCCGACCTGCGCGTGGTGCAGATGCTGCTCGGCCACGCCGACATCTCCACCACGCAGATCTACACCCACGTCGCGC
GCGAGCGGCTGCGCACACTGCATGCGCAGCACCATCCGCGCGGATAG

Protein sequence :
MTKAAPEVLAPARLSAETIQRFCDALWLEDGLARNTLDAYRRDLTLYAQWLAERGKAIDQTEDGDLADYFAARHAESRAS
SANRRRTVFKRFFQWALREHVISADPSRLLSTAKQPPRIPKTLSEAQVEALIAAPDIDTPLGLRDRAMIELMYASGLRVS
EIVALKTVEVGLNEGVVRVVSGKGGKDRLVPFGAEAGDWLRRYLRDGRTALLGERTADALFVTARGDGMTRQAFWHLIKR
YALRADLHAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLRTLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-51 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-51 54