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Name : kdpB (RPSI07_0058) Accession : YP_003750762.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Unknown Product : P-type ATPase, high-affinity potassium transport system, B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 69208 - 71442 bp Length : 2235 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15379567, 6146979, 9858692; Product type t : transporter DNA sequence : ATGGCTCTCCGTTATCCTGAATCCGATCCCGTGGTGCGCACCGTCAAGCATCATCTGGACAGCACGGACGCTGCCGCCCA TGCCGCCGCGTCCGCCCGCACCACCACGCACCACGGCGGCCATCATCCGCTGAGCGCCAAGGAAGTGCGCAAGCTGTCGA TGCTTTCGCCGGCGCTGGTCAAGCCCGCCATCGTCGACAGTTTCCGCAAGCTGTCGCCGCGCGCGCAGGCCAAGAACCCG GTAATGTTCGTCGTCTACATCGGCAGCATCCTGACCACCCTGCTGTGGATCATGGCGCTGCGCGGCCAGGCCGAGGCCCC GGCGGGCTTCATCCTCGCTGTGTCGGTGTGGCTGTGGTTCACTGTGCTGTTCGCCAACTTTGCCGAGGCGCTGGCCGAGG GCCGCAGCAAGCAGCAGGCCGCCTCGCTGCGCGGCATCAAGACCACCGTGCAGGCCAAGGTGCTGGCGGATCCGCAGCGG CGCGACCGCGTGCAATCGCGCGCGGCCACCGCGCTGCGCCGCGGTGACGTCGTCCTCATCGAAGCCGGCGACATGGTGCC CGGTGATGGCGAGGTCATCGAAGGCGTGGCCTCGGTGGACGAGAGCGCCATCACCGGTGAATCCGCACCGGTGATCCGCG AATCCGGCGGCGATTTCTCGTCGGTCACCGGCGGCACGCGCGTGCTGTCGGACTGGGTCGTGGTGCGCATCACCGCCAAT CCGGGCGAGAGCTTCCTCGACCGCATGATCTCGATGGTGGAAGGCGCCAAGCGCCAGAAGACGCCCAACGAGCTGGCGCT GACCATCCTGCTGGTGAGCCTGACCATCATCCTGCTGCTGGCGACCGTCACGCTGCTGCCGTACTCGATCTTCTCGGTGG AGGTGATGAAGGCCGCGGGGGTGACAAGTTCGCCCATCACGATCACCGTGCTGGTGGCGCTGCTGGTGTGCCTGATCCCG ACCACCATCGGCGGGCTGCTGTCGGCCATCGGCGTGGCGGGCATGAGCCGCATGATGCAGGCCAACGTGATCGCCACCTC TGGCCGTGCGGTGGAAGCCGCCGGCGACGTGGACGTGCTGCTGCTCGACAAGACCGGCACCATCACGCACGGCAACCGCC AGGCCTCGCGCTTCCTGCCCGCGCCCGGCGTGACGGTCAAGGCGCTGGCCGAGGCCGCGTGGCTGTCGTCGCTGGCCGAC GAGACGCCCGAAGGCCGCAGCATCGTCACGCTGGCGCGCCAGCTGGGCGAGGCCGCCGTCGATGAGGCGGCGCTCGCGCA GGCGCAGCCGGTGTTCGTGCCCTTTTCCGCGCAGACGCGCATGAGCGGCATCAACGTGGCCCTCGGTGGCGAGGCGCACC AGATCCGCAAGGGCGCCGCCGACGCCATCCGCACGCACGTGACGGCGCTGGCCGGCAAGTTTCCCGACGCCGTGCTGGCC GCCGTGGAAGACGTGGCGCGCAAGGGCGGCACGCCGCTGGTGGTCTCCGACAACGACCGCGTGCTGGGCGTGGTGGAACT GAAGGACATCGTCAAGGCTGGCATCCGCGAGCGCTTTGCCGAGCTGCGCCAGATGGGCATCAAGACGGTGATGATCACTG GCGACAACCGCCTGACCGCCGCCTCCATCGCGGCCGAAGCGGGCGTCGACGACTTCATCGCCGAGGCCACGCCGGAGACC AAGCTCGCGCTGATCCGCGAACAGCAGGCGCAGGGCCGCCTGGTGGCGATGACCGGCGACGGCACCAACGACGCGCCCGC GCTCGCGCAGGCCGACGTGGCGGTCGCCATGAACAGCGGCACGCAGGCCGCCAAGGAGGCGGGCAACATGGTCGACCTGG ATTCCAGCCCGACCAAGCTGATCCAGATCGTCGAGATCGGCAAGCAGATGCTGATGACGCGCGGCTCGCTCACCACGTTC TCCATCGCCAACGATGTGGCCAAGTATTTCGCCATCATCCCGGCGGCGTTCGCGACCACCTATCCGCAGCTGGCCGCGCT CAACGTGATGCGCCTGGCCACGCCCGCGTCGGCCGTGATGAGCGCGGTGATCTTCAATGCGCTGATCATCGTGTGCCTGA TCCCGCTGGCGCTGAAGGGCGTGAAGTACCGCCCGCTCGGTGCCGCCGCGCTGCTGCGCCGCAACCTCTGGATCTACGGC CTGGGCGGCCTGCTGCTGCCCTTCCCCGGCATCAAGCTGATCGACATGTTCCTGGCCGCGATGGGCTGGGTCTGA Protein sequence : MALRYPESDPVVRTVKHHLDSTDAAAHAAASARTTTHHGGHHPLSAKEVRKLSMLSPALVKPAIVDSFRKLSPRAQAKNP VMFVVYIGSILTTLLWIMALRGQAEAPAGFILAVSVWLWFTVLFANFAEALAEGRSKQQAASLRGIKTTVQAKVLADPQR RDRVQSRAATALRRGDVVLIEAGDMVPGDGEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWVVVRITAN PGESFLDRMISMVEGAKRQKTPNELALTILLVSLTIILLLATVTLLPYSIFSVEVMKAAGVTSSPITITVLVALLVCLIP TTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTITHGNRQASRFLPAPGVTVKALAEAAWLSSLAD ETPEGRSIVTLARQLGEAAVDEAALAQAQPVFVPFSAQTRMSGINVALGGEAHQIRKGAADAIRTHVTALAGKFPDAVLA AVEDVARKGGTPLVVSDNDRVLGVVELKDIVKAGIRERFAELRQMGIKTVMITGDNRLTAASIAAEAGVDDFIAEATPET KLALIREQQAQGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSSPTKLIQIVEIGKQMLMTRGSLTTF SIANDVAKYFAIIPAAFATTYPQLAALNVMRLATPASAVMSAVIFNALIIVCLIPLALKGVKYRPLGAAALLRRNLWIYG LGGLLLPFPGIKLIDMFLAAMGWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-157 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-157 | 60 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 8e-136 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 8e-136 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 8e-136 | 54 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-137 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 6e-136 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 8e-136 | 54 |
