Gene Information

Name : RPSI07_0564 (RPSI07_0564)
Accession : YP_003751240.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Virulence
Product : putative response regulator, CheY family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 552452 - 553159 bp
Length : 708 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator

DNA sequence : 
ATGCGGATCTTGCTGGTGGAGGATGAAGAGGAGCTGGCAGCGTGGCTGTCGCGCGCGCTGGCGCAGAGCGGCTTCGTGGT
GGAGCGCGCGGCGGACGGACTGGCGGCGGAGGCATTCCTGGCCTCGGGCGAATTCGATGCCGTCGTGCTGGACCTGCGCC
TGCCGCGCAAGGACGGCTTTGCCGTGCTGGCCGACATGCGCGCGCGCGACGATCGCACGCCGGTGCTGATCCTGACGGCC
CAGGGCGCGCTGGACGAGCGCGTGCGCGGCCTGAACGCCGGCGCCGACGACTTCCTCACCAAACCGTTTGCGCTATCGGA
GCTCGAAGCGCGGCTGATGGCGCTGATCCGCCGCAGCCGGGGCCGGGCGTTCCCGCGTCTGCGCTGCGGGCCGCTGGAAT
TCGACACCGGCCGCAAGGCCTTCCTGCTGGCGGGCGAGCCACTGTCGCTGACGCCGCGCGAGCACGCCGCGCTGTCCGCG
CTGCTGCACAAGACCGGGCAACCGATCAGCAAGGTCCATCTGTTCGACAAAGTGTTCAACCTGGACAGCGATTCCAGCCC
GGACGCCGTGGAAGTGGTCGTGCATCGCCTGCGCAAAAAGCTCGCGGGGTCCGGTGTGCAGATCGTCACGGTGCGCGGGC
TGGGCTACCTGCTCGAAGCCGAAGCAAACGGCGTCCCGCAGGTGGCGGGCGACACGTCCGCGCCATGA

Protein sequence : 
MRILLVEDEEELAAWLSRALAQSGFVVERAADGLAAEAFLASGEFDAVVLDLRLPRKDGFAVLADMRARDDRTPVLILTA
QGALDERVRGLNAGADDFLTKPFALSELEARLMALIRRSRGRAFPRLRCGPLEFDTGRKAFLLAGEPLSLTPREHAALSA
LLHKTGQPISKVHLFDKVFNLDSDSSPDAVEVVVHRLRKKLAGSGVQIVTVRGLGYLLEAEANGVPQVAGDTSAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPSI07_0564 YP_003751240.1 putative response regulator, CheY family BAC0487 Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPSI07_0564 YP_003751240.1 putative response regulator, CheY family VFG0473 Protein 1e-34 42